Difference between revisions of "CotX"
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=Expression and regulation= | =Expression and regulation= | ||
− | * '''Operon:''' | + | * '''Operon:''' ''[[cotV]]-[[cotW]]-[[cotX]]'' [http://www.ncbi.nlm.nih.gov/pubmed/7519271 PubMed] |
− | * '''[[Sigma factor]]:''' | + | ''cotX'' [http://www.ncbi.nlm.nih.gov/pubmed/7519271 PubMed] |
+ | |||
+ | |||
+ | * '''[[Sigma factor]]:''' before ''[[cotV]]'': [[SigK]] [http://www.ncbi.nlm.nih.gov/pubmed/7519271 PubMed] | ||
+ | |||
+ | before ''[[cotX]]'': [[SigK]] [http://www.ncbi.nlm.nih.gov/pubmed/7519271 PubMed] | ||
* '''Regulation:''' repressed by casamino acids [http://www.ncbi.nlm.nih.gov/pubmed/12107147 PubMed] | * '''Regulation:''' repressed by casamino acids [http://www.ncbi.nlm.nih.gov/pubmed/12107147 PubMed] | ||
− | * '''Regulatory mechanism:''' | + | * '''Regulatory mechanism:''' upstream of ''[[cotX]]'': [[SpoIIID]]: repression [http://www.ncbi.nlm.nih.gov/pubmed/10788508 PubMed], upstream of both promoters: [[GerE]]: transcription activation [http://www.ncbi.nlm.nih.gov/pubmed/7519271 PubMed] |
− | * '''Additional information:''' | + | * '''Additional information:''' |
=Biological materials = | =Biological materials = |
Revision as of 13:55, 1 May 2009
- Description: spore coat protein (insoluble fraction)
Gene name | cotX |
Synonyms | |
Essential | no |
Product | spore coat protein (insoluble fraction) |
Function | resistance of the spore |
MW, pI | 18 kDa, 4.228 |
Gene length, protein length | 516 bp, 172 aa |
Immediate neighbours | cotY, cotW |
Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context This image was kindly provided by SubtiList
|
Contents
The gene
Basic information
- Coordinates:
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization: spore wall (according to Swiss-Prot)
Database entries
- Structure:
- Swiss prot entry:
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
cotX PubMed
- Sigma factor: before cotV: SigK PubMed
- Regulation: repressed by casamino acids PubMed
- Regulatory mechanism: upstream of cotX: SpoIIID: repression PubMed, upstream of both promoters: GerE: transcription activation PubMed
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody: