Difference between revisions of "Rex"

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(Genes/ operons controlled by Rex)
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* '''Description:''' write here <br/><br/>
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* '''Description:''' transcriptional repressor of anaerobically expressed genes involved in anaerobic respiration and fermentation <br/><br/>
  
 
{| align="right" border="1" cellpadding="2"  
 
{| align="right" border="1" cellpadding="2"  
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|style="background:#ABCDEF;" align="center"| '''Essential''' || no  
 
|style="background:#ABCDEF;" align="center"| '''Essential''' || no  
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''Product''' ||  
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|style="background:#ABCDEF;" align="center"| '''Product''' || transcriptional repressor
 
|-
 
|-
|style="background:#ABCDEF;" align="center"|'''Function''' || unknown
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|style="background:#ABCDEF;" align="center"|'''Function''' || regulation of fermentation and anaerobic respiration
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 23 kDa, 6.772   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 23 kDa, 6.772   

Revision as of 10:28, 15 April 2009

  • Description: transcriptional repressor of anaerobically expressed genes involved in anaerobic respiration and fermentation

Gene name rex
Synonyms ydiH
Essential no
Product transcriptional repressor
Function regulation of fermentation and anaerobic respiration
MW, pI 23 kDa, 6.772
Gene length, protein length 645 bp, 215 aa
Immediate neighbours ydiG, tatAY
Gene sequence (+200bp) Protein sequence
Genetic context
YdiH context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Coordinates:

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Genes/ operons controlled by Rex

alsS-alsD, cydA-cydB-cydC-cydD, ldh-lctP, ywcJ PubMed

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity: NADH (indication of low oxygen concentration) releases Rex from DNA PubMed
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • Swiss prot entry:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Claes von Wachenfeldt, Lund University, Sweden Homepage

Your additional remarks

References

  1. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed