Difference between revisions of "RatA"

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* '''Description:''' antisense RNA<br/><br/>
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* '''Description:''' regulatory RNA, ncRNA, antisense for txpA <br/><br/>
  
 
{| align="right" border="1" cellpadding="2"  
 
{| align="right" border="1" cellpadding="2"  
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|style="background:#ABCDEF;" align="center"| '''Essential''' || no
 
|style="background:#ABCDEF;" align="center"| '''Essential''' || no
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''Product''' || RNA antitoxin A
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|style="background:#ABCDEF;" align="center"| '''Product''' || txpA antisense RNA
 
|-
 
|-
|style="background:#ABCDEF;" align="center"|'''Function''' || antisense RNA for ''[[txpA]]''
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|style="background:#ABCDEF;" align="center"|'''Function''' || control of txpA expression
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"| '''Gene length''' || 222 bp
 
|style="background:#ABCDEF;" align="center"| '''Gene length''' || 222 bp

Revision as of 15:38, 23 March 2009

  • Description: regulatory RNA, ncRNA, antisense for txpA

Gene name ratA
Synonyms
Essential no
Product txpA antisense RNA
Function control of txpA expression
Gene length 222 bp
Immediate neighbours genA, genB
Gene sequence (+200bp)
Genetic context
File:GenE context.gif



The gene

Basic information

  • Coordinates (CDS):

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry:
  • Structure:

Additional information

The RNA

binds the txpA mRNA and triggers its degradation PubMed

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Richard Losick, Harvard University, Cambridge, USA Homepage

Your additional remarks

References

  1. Silvaggi JM, Perkins JB, Losick R (2005) Small untranslated RNA antitoxin in Bacillus subtilis.J. Bacteriol. 187: 6641-6650. PubMed
  2. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed