Difference between revisions of "FliY"
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= This gene is a member of the following [[regulons]] = | = This gene is a member of the following [[regulons]] = | ||
{{SubtiWiki regulon|[[CodY regulon]]}}, | {{SubtiWiki regulon|[[CodY regulon]]}}, | ||
| + | {{SubtiWiki regulon|[[DegU regulon]]}}, | ||
{{SubtiWiki regulon|[[SigD regulon]]}}, | {{SubtiWiki regulon|[[SigD regulon]]}}, | ||
{{SubtiWiki regulon|[[Spo0A regulon]]}} | {{SubtiWiki regulon|[[Spo0A regulon]]}} | ||
| Line 63: | Line 64: | ||
=== Additional information=== | === Additional information=== | ||
| − | |||
| − | |||
| − | |||
=The protein= | =The protein= | ||
| Line 125: | Line 123: | ||
** [[CodY]]: transcription repression {{PubMed|12730172}} | ** [[CodY]]: transcription repression {{PubMed|12730172}} | ||
** [[DegU]] (non-phosphorylated): transcription activation {{PubMed|17850253}} | ** [[DegU]] (non-phosphorylated): transcription activation {{PubMed|17850253}} | ||
| + | ** [[DegU]]-P: transcription repression {{PubMed|24386445}} | ||
| + | ** [[DegU]]-P in complex with [[SwrA]]: transcription activation {{PubMed|24386445}} | ||
* '''Additional information:''' | * '''Additional information:''' | ||
| Line 152: | Line 152: | ||
=References= | =References= | ||
| − | <pubmed>14749334,1447979,,14651647, 9657996,8157612,15175317,12920116 17850253 22517742</pubmed> | + | <pubmed>14749334,1447979,,14651647, 9657996,8157612,15175317,12920116 17850253 22517742 24386445</pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 15:46, 29 December 2014
- Description: flagellar motor switch protein
| Gene name | fliY |
| Synonyms | cheD |
| Essential | no |
| Product | flagellar motor switch protein |
| Function | movement and chemotaxis |
| Gene expression levels in SubtiExpress: fliY | |
| MW, pI | 40 kDa, 4.117 |
| Gene length, protein length | 1134 bp, 378 aa |
| Immediate neighbours | fliM, cheY |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
motility and chemotaxis, membrane proteins, phosphoproteins
This gene is a member of the following regulons
CodY regulon, DegU regulon, SigD regulon, Spo0A regulon
The gene
Basic information
- Locus tag: BSU16320
Phenotypes of a mutant
Database entries
- BsubCyc: BSU16320
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: fliN/mopA/spaO family (according to Swiss-Prot) cheC family
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- phosphorylated on Arg-251 PubMed
- Cofactor(s):
- Effectors of protein activity:
- Localization: cell membrane (according to Swiss-Prot)
Database entries
- BsubCyc: BSU16320
- Structure:
- UniProt: P24073
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Regulatory mechanism:
- Additional information:
- number of protein molecules per cell (minimal medium with glucose and ammonium): 1488 PubMed
- number of protein molecules per cell (complex medium with amino acids, without glucose): 1885 PubMed
- number of protein molecules per cell (minimal medium with glucose and ammonium, exponential phase): 850 PubMed
- number of protein molecules per cell (minimal medium with glucose and ammonium, early stationary phase after glucose exhaustion): 900 PubMed
- number of protein molecules per cell (minimal medium with glucose and ammonium, late stationary phase after glucose exhaustion): 713 PubMed
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
