Difference between revisions of "AroH"
| Line 37: | Line 37: | ||
<br/><br/><br/><br/> | <br/><br/><br/><br/> | ||
<br/><br/><br/><br/> | <br/><br/><br/><br/> | ||
| − | + | <br/><br/> | |
| − | |||
| − | |||
| − | |||
| − | |||
= [[Categories]] containing this gene/protein = | = [[Categories]] containing this gene/protein = | ||
| Line 65: | Line 61: | ||
=== Additional information=== | === Additional information=== | ||
| − | |||
| − | |||
| − | |||
=The protein= | =The protein= | ||
| Line 87: | Line 80: | ||
* '''Modification:''' | * '''Modification:''' | ||
| − | * ''' | + | * '''[[Cofactors]]:''' |
* '''Effectors of protein activity:''' | * '''Effectors of protein activity:''' | ||
| Line 98: | Line 91: | ||
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU22690&redirect=T BSU22690] | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU22690&redirect=T BSU22690] | ||
| − | * '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=2CHT 2CHT] (complex with a transition state analog) | + | * '''Structure:''' |
| + | ** [http://www.rcsb.org/pdb/explore.do?structureId=2CHT 2CHT] (complex with a transition state analog) | ||
| + | ** [http://www.rcsb.org/pdb/explore.do?structureId=1DBF 1DBF] | ||
* '''UniProt:''' [http://www.uniprot.org/uniprot/P19080 P19080] | * '''UniProt:''' [http://www.uniprot.org/uniprot/P19080 P19080] | ||
| Line 116: | Line 111: | ||
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=aroH_2377632_2378015_-1 aroH] {{PubMed|22383849}} | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=aroH_2377632_2378015_-1 aroH] {{PubMed|22383849}} | ||
| − | * '''Sigma factor:''' | + | * '''[[Sigma factor]]:''' |
* '''Regulation:''' | * '''Regulation:''' | ||
| Line 146: | Line 141: | ||
=References= | =References= | ||
| − | <pubmed>8378335,, </pubmed> | + | <pubmed>8378335, 25422475, </pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 10:28, 26 November 2014
- Description: chorismate mutase (isozymes 1 and 2)
| Gene name | aroH |
| Synonyms | |
| Essential | no |
| Product | chorismate mutase (isozymes 1 and 2) |
| Function | biosynthesis of aromatic amino acids |
| Gene expression levels in SubtiExpress: aroH | |
| Metabolic function and regulation of this protein in SubtiPathways: aroH | |
| MW, pI | 14 kDa, 5.524 |
| Gene length, protein length | 381 bp, 127 aa |
| Immediate neighbours | trpE, aroB |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
biosynthesis/ acquisition of amino acids
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU22690
Phenotypes of a mutant
Database entries
- BsubCyc: BSU22690
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: Chorismate = prephenate (according to Swiss-Prot)
- Protein family: BCKDHA family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Effectors of protein activity:
Database entries
- BsubCyc: BSU22690
- UniProt: P19080
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Regulation:
- Regulatory mechanism:
- Additional information:
- number of protein molecules per cell (minimal medium with glucose and ammonium, exponential phase): 1441 PubMed
- number of protein molecules per cell (minimal medium with glucose and ammonium, early stationary phase after glucose exhaustion): 1006 PubMed
- number of protein molecules per cell (minimal medium with glucose and ammonium, late stationary phase after glucose exhaustion): 804 PubMed
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
