Difference between revisions of "YosP"
Line 117: | Line 117: | ||
* '''Additional information:''' | * '''Additional information:''' | ||
** number of protein molecules per cell (complex medium with amino acids, without glucose): 209 {{PubMed|24696501}} | ** number of protein molecules per cell (complex medium with amino acids, without glucose): 209 {{PubMed|24696501}} | ||
+ | ** number of protein molecules per cell (minimal medium with glucose and ammonium, exponential phase): 1955 {{PubMed|21395229}} | ||
+ | ** number of protein molecules per cell (minimal medium with glucose and ammonium, early stationary phase after glucose exhaustion): 982 {{PubMed|21395229}} | ||
+ | ** number of protein molecules per cell (minimal medium with glucose and ammonium, late stationary phase after glucose exhaustion): 668 {{PubMed|21395229}} | ||
=Biological materials = | =Biological materials = | ||
− | |||
* '''Mutant:''' | * '''Mutant:''' | ||
Revision as of 14:19, 17 April 2014
- Description: similar to ribonucleoside-diphosphate reductase (beta subunit)
Gene name | yosP |
Synonyms | nrdF |
Essential | no |
Product | unknown |
Function | unknown |
Gene expression levels in SubtiExpress: yosP | |
MW, pI | 22 kDa, 6.094 |
Gene length, protein length | 1795 bp, 329 aa |
Immediate neighbours | yosR, yosQ |
Sequences | Protein DNA DNA_with_flanks |
Genetic context This image was kindly provided by SubtiList
| |
Expression at a glance PubMed |
Contents
Categories containing this gene/protein
SP-beta prophage, poorly characterized/ putative enzymes
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU20040
Phenotypes of a mutant
Database entries
- BsubCyc: BSU20040
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s): NrdF
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- BsubCyc: BSU20040
- Structure:
- UniProt: O30601
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Regulation:
- Regulatory mechanism:
- Additional information:
- number of protein molecules per cell (complex medium with amino acids, without glucose): 209 PubMed
- number of protein molecules per cell (minimal medium with glucose and ammonium, exponential phase): 1955 PubMed
- number of protein molecules per cell (minimal medium with glucose and ammonium, early stationary phase after glucose exhaustion): 982 PubMed
- number of protein molecules per cell (minimal medium with glucose and ammonium, late stationary phase after glucose exhaustion): 668 PubMed
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Slavisa Stankovic, Blazenka Soldo, Tanja Beric-Bjedov, Jelena Knezevic-Vukcevic, Draga Simic, Vladimir Lazarevic
Subspecies-specific distribution of intervening sequences in the Bacillus subtilis prophage ribonucleotide reductase genes.
Syst Appl Microbiol: 2007, 30(1);8-15
[PubMed:16621400]
[WorldCat.org]
[DOI]
(P p)
V Lazarevic
Ribonucleotide reductase genes of Bacillus prophages: a refuge to introns and intein coding sequences.
Nucleic Acids Res: 2001, 29(15);3212-8
[PubMed:11470879]
[WorldCat.org]
[DOI]
(I p)
V Lazarevic, B Soldo, A Düsterhöft, H Hilbert, C Mauël, D Karamata
Introns and intein coding sequence in the ribonucleotide reductase genes of Bacillus subtilis temperate bacteriophage SPbeta.
Proc Natl Acad Sci U S A: 1998, 95(4);1692-7
[PubMed:9465078]
[WorldCat.org]
[DOI]
(P p)