Difference between revisions of "RpsD"
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[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] |
Revision as of 16:22, 23 February 2015
- Description: ribosomal protein
Gene name | rpsD |
Synonyms | |
Essential | yes PubMed |
Product | ribosomal protein S4 (BS4) |
Function | translation |
Gene expression levels in SubtiExpress: rpsD | |
Interactions involving this protein in SubtInteract: RpsD | |
MW, pI | 22 kDa, 10.243 |
Gene length, protein length | 600 bp, 200 aa |
Immediate neighbours | dgcP, tyrS |
Sequences | Protein DNA DNA_with_flanks |
Genetic context This image was kindly provided by SubtiList
| |
Expression at a glance PubMed |
Contents
Categories containing this gene/protein
translation, essential genes, universally conserved proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU29660
Phenotypes of a mutant
essential PubMed
Database entries
- BsubCyc: BSU29660
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: ribosomal protein S4P family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- BsubCyc: BSU29660
- Structure: 1C06 (Geobacillus stearothermophilus)
- UniProt: P21466
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulation:
- RelA dependent downregulation (Class I) during stringent response PubMed
- autorepression of rpsD expression upon binding of excess RpsD to a RNA switch in the untranslated region of the rpsD mRNA PubMed
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References