Difference between revisions of "Efp"
| Line 123: | Line 123: | ||
** number of protein molecules per cell (minimal medium with glucose and ammonium): 649 {{PubMed|24696501}} | ** number of protein molecules per cell (minimal medium with glucose and ammonium): 649 {{PubMed|24696501}} | ||
** number of protein molecules per cell (complex medium with amino acids, without glucose): 2275 {{PubMed|24696501}} | ** number of protein molecules per cell (complex medium with amino acids, without glucose): 2275 {{PubMed|24696501}} | ||
| + | ** number of protein molecules per cell (minimal medium with glucose and ammonium, exponential phase): 5117 {{PubMed|21395229}} | ||
| + | ** number of protein molecules per cell (minimal medium with glucose and ammonium, early stationary phase after glucose exhaustion): 1779 {{PubMed|21395229}} | ||
| + | ** number of protein molecules per cell (minimal medium with glucose and ammonium, late stationary phase after glucose exhaustion): 1876 {{PubMed|21395229}} | ||
=Biological materials = | =Biological materials = | ||
| − | |||
* '''Mutant:''' | * '''Mutant:''' | ||
Revision as of 14:05, 17 April 2014
- Description: elongation factor P, important for the translation of proteins containing three or more consecutive proline residues
| Gene name | efp |
| Synonyms | yqhU, yqgF |
| Essential | no |
| Product | elongation factor P |
| Function | translation |
| Gene expression levels in SubtiExpress: efp | |
| MW, pI | 20 kDa, 4.845 |
| Gene length, protein length | 555 bp, 185 aa |
| Immediate neighbours | yqhV, papA |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
translation, membrane proteins
This gene is a member of the following regulons
Efp-dependent proteins
The gene
Basic information
- Locus tag: BSU24450
Phenotypes of a mutant
Database entries
- BsubCyc: BSU24450
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: transpeptidase family (according to Swiss-Prot) elongation factor P family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization: cell membrane (according to Swiss-Prot), cell membrane (according to Swiss-Prot)
Database entries
- BsubCyc: BSU24450
- Structure: 1YBY (Efp from Clostridium thermocellum)
- UniProt: P49778
- KEGG entry: [2]
- E.C. number:
Additional information
- subject to Clp-dependent proteolysis upon glucose starvation PubMed
Expression and regulation
- Operon:
- Regulation:
- Regulatory mechanism:
- Additional information: subject to Clp-dependent proteolysis upon glucose starvation PubMed
- number of protein molecules per cell (minimal medium with glucose and ammonium): 649 PubMed
- number of protein molecules per cell (complex medium with amino acids, without glucose): 2275 PubMed
- number of protein molecules per cell (minimal medium with glucose and ammonium, exponential phase): 5117 PubMed
- number of protein molecules per cell (minimal medium with glucose and ammonium, early stationary phase after glucose exhaustion): 1779 PubMed
- number of protein molecules per cell (minimal medium with glucose and ammonium, late stationary phase after glucose exhaustion): 1876 PubMed
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
