Difference between revisions of "YbxG"
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=== Additional information=== | === Additional information=== | ||
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=The protein= | =The protein= | ||
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ybxG_226566_227954_1 ybxG] {{PubMed|22383849}} | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ybxG_226566_227954_1 ybxG] {{PubMed|22383849}} | ||
| − | * '''Sigma factor:''' | + | * '''[[Sigma factor]]:''' |
* '''Regulation:''' expression activated by glucose (3.7 fold) [http://www.ncbi.nlm.nih.gov/pubmed/12850135 PubMed] | * '''Regulation:''' expression activated by glucose (3.7 fold) [http://www.ncbi.nlm.nih.gov/pubmed/12850135 PubMed] | ||
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=Biological materials = | =Biological materials = | ||
| − | * '''Mutant:''' | + | * '''Mutant:''' BKE02060 (''[[ybxG]]''::''erm'', available in the BGSC and in [[Fabian Commichau]]'s lab) |
* '''Expression vector:''' | * '''Expression vector:''' | ||
Revision as of 19:02, 1 February 2015
- Description: similar to amino acid permease
| Gene name | ybxG |
| Synonyms | ybdP |
| Essential | no |
| Product | unknown |
| Function | unknown |
| Gene expression levels in SubtiExpress: ybxG | |
| Metabolic function and regulation of this protein in SubtiPathways: YbxG | |
| MW, pI | 49 kDa, 9.602 |
| Gene length, protein length | 1386 bp, 462 aa |
| Immediate neighbours | ybdO, csgA |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
transporters/ other, membrane proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU02060
Phenotypes of a mutant
Database entries
- BsubCyc: BSU02060
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- secondary amino acid transporter
- amino acid, polyamine, organocation (APC) superfamily of transporters, TC 2.A.3
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
- cell membrane (according to Swiss-Prot)
Database entries
- BsubCyc: BSU02060
- Structure:
- UniProt: P54425
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Regulation: expression activated by glucose (3.7 fold) PubMed
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant: BKE02060 (ybxG::erm, available in the BGSC and in Fabian Commichau's lab)
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Hans-Matti Blencke, Georg Homuth, Holger Ludwig, Ulrike Mäder, Michael Hecker, Jörg Stülke
Transcriptional profiling of gene expression in response to glucose in Bacillus subtilis: regulation of the central metabolic pathways.
Metab Eng: 2003, 5(2);133-49
[PubMed:12850135]
[WorldCat.org]
[DOI]
(P p)
