Difference between revisions of "PpiB"

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* '''Additional information:'''
 
* '''Additional information:'''
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** number of protein molecules per cell (minimal medium with glucose and ammonium): 4512 {{PubMed|24696501}}
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** number of protein molecules per cell (complex medium with amino acids, without glucose): 6732 {{PubMed|24696501}}
  
 
=Biological materials =
 
=Biological materials =

Revision as of 09:30, 17 April 2014

  • Description: peptidyl-prolyl isomerase

Gene name ppiB
Synonyms cypBS
Essential no
Product peptidyl-prolyl isomerase
Function protein folding
Gene expression levels in SubtiExpress: ppiB
MW, pI 15 kDa, 5.472
Gene length, protein length 429 bp, 143 aa
Immediate neighbours ypzD, ypuA
Sequences Protein DNA DNA_with_flanks
Genetic context
PpiB context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
PpiB expression.png
























Categories containing this gene/protein

chaperones/ protein folding

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU23360

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: Peptidylproline (omega=180) = peptidylproline (omega=0) (according to Swiss-Prot)
  • Protein family: cyclophilin-type PPIase family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information:
    • number of protein molecules per cell (minimal medium with glucose and ammonium): 4512 PubMed
    • number of protein molecules per cell (complex medium with amino acids, without glucose): 6732 PubMed

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References