Difference between revisions of "YkuO"

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=== Additional information===
 
=== Additional information===
 
 
 
  
 
=The protein=
 
=The protein=
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** induced upon iron starvation ([[Fur]]) {{PubMed|12354229}}  
 
** induced upon iron starvation ([[Fur]]) {{PubMed|12354229}}  
 
** repressed by casamino acids [http://www.ncbi.nlm.nih.gov/pubmed/12107147 PubMed]
 
** repressed by casamino acids [http://www.ncbi.nlm.nih.gov/pubmed/12107147 PubMed]
 +
** expressed under anaerobic conditions ([[ResD]]) {{PubMed|24214949}}
 +
** induced by nitric oxide under anaerobic conditions ([[NsrR]]) {{PubMed|24214949}}
  
 
* '''Regulatory mechanism:'''  
 
* '''Regulatory mechanism:'''  
 
** [[Fur]]: transcription repression {{PubMed|12354229}}  
 
** [[Fur]]: transcription repression {{PubMed|12354229}}  
 +
** [[ResD]]: transcription activation {{PubMed|24214949}}
 +
** [[NsrR]]: transcription repression {{PubMed|24214949}}
  
 
* '''Additional information:'''
 
* '''Additional information:'''
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=References=
 
=References=
  
<pubmed>12354229,12107147, </pubmed>
+
<pubmed>12354229,12107147, 24214949</pubmed>
  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 15:33, 26 May 2014

  • Description: unknown

Gene name ykuO
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: ykuO
Metabolic function and regulation of this protein in SubtiPathways:
ykuO
MW, pI 33 kDa, 8.128
Gene length, protein length 891 bp, 297 aa
Immediate neighbours ykuN, ykuP
Sequences Protein DNA DNA_with_flanks
Genetic context
YkuO context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YkuO expression.png















Categories containing this gene/protein

proteins of unknown function

This gene is a member of the following regulons

Fur regulon

The gene

Basic information

  • Locus tag: BSU14160

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • induced upon iron starvation (Fur) PubMed
    • repressed by casamino acids PubMed
    • expressed under anaerobic conditions (ResD) PubMed
    • induced by nitric oxide under anaerobic conditions (NsrR) PubMed
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References