Difference between revisions of "NagR"
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* '''Catalyzed reaction/ biological activity:''' transcription repression of ''[[nagP]]'' and of the putative ''[[nagA]]-[[nagB]]-[[nagR]]'' operon in the absence of N-acetylglycosamine {{PubMed|20047956,21602348}}, weak repression of ''[[yflG]]'' {{PubMed|16207374}} | * '''Catalyzed reaction/ biological activity:''' transcription repression of ''[[nagP]]'' and of the putative ''[[nagA]]-[[nagB]]-[[nagR]]'' operon in the absence of N-acetylglycosamine {{PubMed|20047956,21602348}}, weak repression of ''[[yflG]]'' {{PubMed|16207374}} | ||
| − | * '''Protein family:''' | + | * '''Protein family:''' [[GntR family]] of transcription factors |
* '''Paralogous protein(s):''' | * '''Paralogous protein(s):''' | ||
| Line 79: | Line 79: | ||
* '''Kinetic information:''' K(D) for N-acetylglucosamine-6-phosphate: 1 mM {{PubMed|20047956}} | * '''Kinetic information:''' K(D) for N-acetylglucosamine-6-phosphate: 1 mM {{PubMed|20047956}} | ||
| − | * '''Domains:''' | + | * '''[[Domains]]:''' |
* '''Modification:''' | * '''Modification:''' | ||
| − | * ''' | + | * '''[[Cofactors]]:''' |
* '''Effectors of protein activity:''' | * '''Effectors of protein activity:''' | ||
| Line 139: | Line 139: | ||
=References= | =References= | ||
| − | <pubmed>19342794,20047956 16207374 21602348 23667565</pubmed> | + | <pubmed>19342794,20047956 16207374 21602348 23667565 24673833 </pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 07:40, 31 March 2014
- Description: transcriptional regulator (GntR family)
| Gene name | nagR |
| Synonyms | yvoA |
| Essential | no |
| Product | transcriptional regulator (GntR family) |
| Function | probably regulator of the putative nagA-nagB-yvoA operon |
| Gene expression levels in SubtiExpress: nagR | |
| Metabolic function and regulation of this protein in SubtiPathways: nagR | |
| MW, pI | 27 kDa, 6.768 |
| Gene length, protein length | 729 bp, 243 aa |
| Immediate neighbours | nagB, yvnB |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
utilization of specific carbon sources, transcription factors and their control
This gene is a member of the following regulons
The NagR regulon:
The gene
Basic information
- Locus tag: BSU35030
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: transcription repression of nagP and of the putative nagA-nagB-nagR operon in the absence of N-acetylglycosamine PubMed, weak repression of yflG PubMed
- Protein family: GntR family of transcription factors
- Paralogous protein(s):
Extended information on the protein
- Kinetic information: K(D) for N-acetylglucosamine-6-phosphate: 1 mM PubMed
- Modification:
- Effectors of protein activity:
Database entries
- UniProt: O34817
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
