Difference between revisions of "BioI"

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=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU30190&redirect=T BSU30190]
  
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/bioWAFDBI-ytbQ.html]
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/bioWAFDBI-ytbQ.html]
Line 100: Line 101:
  
 
=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU30190&redirect=T BSU30190]
  
 
* '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=3EJB 3EJB], [http://www.rcsb.org/pdb/explore.do?structureId=3EJE 3EJE] (complex with [[AcpA]]) {{PubMed|18838690}}
 
* '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=3EJB 3EJB], [http://www.rcsb.org/pdb/explore.do?structureId=3EJE 3EJE] (complex with [[AcpA]]) {{PubMed|18838690}}

Revision as of 14:33, 2 April 2014

Gene name bioI
Synonyms
Essential no
Product cytochrome P450 enzyme
Function biosynthesis of biotin
Gene expression levels in SubtiExpress: bioI
Interactions involving this protein in SubtInteract: BioI
Metabolic function and regulation of this protein in SubtiPathways:
bioI
MW, pI 44 kDa, 6.2
Gene length, protein length 1185 bp, 395 aa
Immediate neighbours ytbQ, bioB
Sequences Protein DNA DNA_with_flanks
Genetic context
BioI context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
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Categories containing this gene/protein

biosynthesis of cofactors

This gene is a member of the following regulons

BirA regulon

The gene

Basic information

  • Locus tag: BSU30190

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: formation of pimelic acid via a multiple-step oxidative cleavage of long-chain fatty acids
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
    • repressed in the presence of biotin (BirA) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Reviews: PubMed

Original publications