Difference between revisions of "GatA"
| Line 58: | Line 58: | ||
=== Database entries === | === Database entries === | ||
| + | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU06680&redirect=T BSU06680] | ||
* '''DBTBS entry:''' no entry | * '''DBTBS entry:''' no entry | ||
| Line 96: | Line 97: | ||
=== Database entries === | === Database entries === | ||
| + | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU06680&redirect=T BSU06680] | ||
* '''Structure:''' [http://www.rcsb.org/pdb/explore/explore.do?pdbId=2DF4 2DF4] ([[GatA]]-[[GatB]]-[[GatC]] complex from ''Staphylococcus aureus'') {{PubMed|16809541}} | * '''Structure:''' [http://www.rcsb.org/pdb/explore/explore.do?pdbId=2DF4 2DF4] ([[GatA]]-[[GatB]]-[[GatC]] complex from ''Staphylococcus aureus'') {{PubMed|16809541}} | ||
Revision as of 13:08, 2 April 2014
- Description: production of glutamyl-tRNA(Gln)
| Gene name | gatA |
| Synonyms | yerM, yedB |
| Essential | yes PubMed |
| Product | glutamyl-tRNA(Gln) amidotransferase subunit A |
| Function | translation |
| Gene expression levels in SubtiExpress: gatA | |
| Interactions involving this protein in SubtInteract: GatA | |
| Metabolic function and regulation of this protein in SubtiPathways: gatA | |
| MW, pI | 52 kDa, 5.24 |
| Gene length, protein length | 1455 bp, 485 aa |
| Immediate neighbours | gatC, gatB |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU06680
Phenotypes of a mutant
essential PubMed
Database entries
- BsubCyc: BSU06680
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: ATP + L-glutamyl-tRNA(Gln) + L-glutamine = ADP + phosphate + L-glutaminyl-tRNA(Gln) + L-glutamate (according to Swiss-Prot)
- Protein family: amidase family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- (GatA-GatB-GatC)-GltX-trnS-Gln (the "transamidosome") PubMed, see a model of the interaction PubMed
Database entries
- BsubCyc: BSU06680
- UniProt: O06491
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
