Difference between revisions of "OpuAB"

From SubtiWiki
Jump to: navigation, search
Line 66: Line 66:
  
 
=== Additional information===
 
=== Additional information===
 
  
 
=The protein=
 
=The protein=
Line 73: Line 72:
  
 
* '''Catalyzed reaction/ biological activity:'''  
 
* '''Catalyzed reaction/ biological activity:'''  
 +
** uptake of glycine betaine
 +
** uptake of dimethylglycine {{PubMed|24561588}}
  
 
* '''Protein family:''' ABC transmembrane type-1 domain (according to Swiss-Prot)
 
* '''Protein family:''' ABC transmembrane type-1 domain (according to Swiss-Prot)
Line 82: Line 83:
 
* '''Kinetic information:'''
 
* '''Kinetic information:'''
  
* '''Domains:'''  
+
* '''[[Domains]]:'''  
  
 
* '''Modification:'''
 
* '''Modification:'''
  
* '''Cofactor(s):'''
+
* '''[[Cofactors]]:'''
  
 
* '''Effectors of protein activity:'''
 
* '''Effectors of protein activity:'''
Line 146: Line 147:
 
=References=
 
=References=
  
<pubmed>16645306,16225868,7622480,10092453,18763711 7622480 16225868, 21296969 22383849 23175650 23646920</pubmed>
+
<pubmed>16645306,16225868,7622480,10092453,18763711 7622480 16225868, 21296969 22383849 23175650 23646920 24561588</pubmed>
  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 14:49, 26 February 2014

Gene name opuAB
Synonyms
Essential no
Product glycine betaine ABC transporter (permease)
Function compatible solute transport
Gene expression levels in SubtiExpress: opuAB
Interactions involving this protein in SubtInteract: OpuAB
Metabolic function and regulation of this protein in SubtiPathways:
opuAB
MW, pI 30 kDa, 9.837
Gene length, protein length 846 bp, 282 aa
Immediate neighbours opuAA, opuAC
Sequences Protein DNA DNA_with_flanks
Genetic context
OpuAB context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
OpuAB expression.png















Categories containing this gene/protein

ABC transporters, coping with hyper-osmotic stress, membrane proteins

This gene is a member of the following regulons

RemA regulon

The gene

Basic information

  • Locus tag: BSU02990

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
    • uptake of glycine betaine
    • uptake of dimethylglycine PubMed
  • Protein family: ABC transmembrane type-1 domain (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Modification:
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • induced by osmotic stress PubMed
    • repressed by intracellular glycine betaine PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Erhard Bremer, University of Marburg, Germany homepage

Your additional remarks

References