Difference between revisions of "YacO"
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=== Database entries === | === Database entries === | ||
+ | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU00960&redirect=T BSU00960] | ||
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/gltX-cysES-yazC-yacOP.html] | * '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/gltX-cysES-yazC-yacOP.html] | ||
Line 95: | Line 96: | ||
=== Database entries === | === Database entries === | ||
+ | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU00960&redirect=T BSU00960] | ||
* '''Structure:''' | * '''Structure:''' |
Revision as of 12:48, 2 April 2014
- Description: putative 23S rRNA methyltransferase
Gene name | yacO |
Synonyms | |
Essential | no |
Product | putative 23S rRNA methyltransferase |
Function | unknown |
Gene expression levels in SubtiExpress: yacO | |
Metabolic function and regulation of this protein in SubtiPathways: yacO | |
MW, pI | 27 kDa, 8.633 |
Gene length, protein length | 747 bp, 249 aa |
Immediate neighbours | mrnC, yacP |
Sequences | Protein DNA DNA_with_flanks |
Genetic context This image was kindly provided by SubtiList
| |
Expression at a glance PubMed |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU00960
Phenotypes of a mutant
Database entries
- BsubCyc: BSU00960
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: RNA methyltransferase trmH family (according to Swiss-Prot)
- Paralogous protein(s): YsgA
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- BsubCyc: BSU00960
- Structure:
- UniProt: Q06753
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulatory mechanism: T-box, overlaps a transcription terminator upstream of cysE: transcription antitermination PubMed
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Ana Gutiérrez-Preciado, Tina M Henkin, Frank J Grundy, Charles Yanofsky, Enrique Merino
Biochemical features and functional implications of the RNA-based T-box regulatory mechanism.
Microbiol Mol Biol Rev: 2009, 73(1);36-61
[PubMed:19258532]
[WorldCat.org]
[DOI]
(I p)