Difference between revisions of "BrxB"

From SubtiWiki
Jump to: navigation, search
Line 14: Line 14:
 
|style="background:#ABCDEF;" align="center"|'''Function''' || de-bacillithiolation of S-bacillithiolated [[OhrR]] and [[MetE]]
 
|style="background:#ABCDEF;" align="center"|'''Function''' || de-bacillithiolation of S-bacillithiolated [[OhrR]] and [[MetE]]
 
|-
 
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU23990 yqiW]
+
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU23990 brxB]
 +
|-
 +
|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://subtiwiki.uni-goettingen.de/interact/ ''Subt''Interact]''': [http://subtiwiki.uni-goettingen.de/interact/index.php?protein=BrxB BrxB]
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 16 kDa, 4.814   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 16 kDa, 4.814   
Line 68: Line 70:
  
 
* '''Catalyzed reaction/ biological activity:'''  
 
* '''Catalyzed reaction/ biological activity:'''  
 +
** de-bacillithiolation of S-bacillithiolated [[OhrR]] and [[MetE]] {{PubMed|24313874}}
  
 
* '''Protein family:''' UPF0403 family (according to Swiss-Prot)
 
* '''Protein family:''' UPF0403 family (according to Swiss-Prot)
Line 85: Line 88:
 
* '''Effectors of protein activity:'''
 
* '''Effectors of protein activity:'''
  
* '''Interactions:'''
+
* '''[[SubtInteract|Interactions]]:'''
 +
** [[BrxB]]-[[MetE]] {{PubMed|24313874}}
 +
** [[BrxB]]-[[OhrR]] {{PubMed|24313874}}
  
* '''Localization:''' cell membrane (according to Swiss-Prot)
+
* '''[[Localization]]:''' cell membrane (according to Swiss-Prot)
  
 
=== Database entries ===
 
=== Database entries ===
Line 105: Line 110:
 
* '''Operon:''' ''brxB'' (according to [http://dbtbs.hgc.jp/COG/prom/yqiW.html DBTBS])
 
* '''Operon:''' ''brxB'' (according to [http://dbtbs.hgc.jp/COG/prom/yqiW.html DBTBS])
  
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yqiW_2493064_2493501_-1 yqiW] {{PubMed|22383849}}
+
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yqiW_2493064_2493501_-1 brxB] {{PubMed|22383849}}
  
 
* '''[[Sigma factor]]:'''  
 
* '''[[Sigma factor]]:'''  

Revision as of 19:17, 13 December 2013

  • Description: bacilliredoxin

Gene name brxB
Synonyms yqiW
Essential no
Product bacilliredoxin
Function de-bacillithiolation of S-bacillithiolated OhrR and MetE
Gene expression levels in SubtiExpress: brxB
Interactions involving this protein in SubtInteract: BrxB
MW, pI 16 kDa, 4.814
Gene length, protein length 435 bp, 145 aa
Immediate neighbours artP, bmrU
Sequences Protein DNA DNA_with_flanks
Genetic context
YqiW context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YqiW expression.png















Categories containing this gene/protein

membrane proteins, resistance against oxidative and electrophile stress

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU23990

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: UPF0403 family (according to Swiss-Prot)
  • Paralogous protein(s): BrxA

Extended information on the protein

  • Kinetic information:
  • Domains: contains an CxC redox motif redox active Cys residue [3]
  • Modification:
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [4]
  • E.C. number:

Additional information

Expression and regulation

  • Operon: brxB (according to DBTBS)
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

YpdA, BrxA, BrxB and YtxJ cooccur in those species predicted to synthesize bacillithiol.

References

Ahmed Gaballa, Bui Khanh Chi, Alexandra A Roberts, Dörte Becher, Chris J Hamilton, Haike Antelmann, John D Helmann
Redox regulation in Bacillus subtilis: The bacilliredoxins BrxA(YphP) and BrxB(YqiW) function in de-bacillithiolation of S-bacillithiolated OhrR and MetE.
Antioxid Redox Signal: 2014, 21(3);357-67
[PubMed:24313874] [WorldCat.org] [DOI] (I p)

Ahmed Gaballa, Gerald L Newton, Haike Antelmann, Derek Parsonage, Heather Upton, Mamta Rawat, Al Claiborne, Robert C Fahey, John D Helmann
Biosynthesis and functions of bacillithiol, a major low-molecular-weight thiol in Bacilli.
Proc Natl Acad Sci U S A: 2010, 107(14);6482-6
[PubMed:20308541] [WorldCat.org] [DOI] (I p)