Difference between revisions of "CspR"
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=== Database entries === | === Database entries === | ||
| + | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU08930&redirect=T BSU08930] | ||
* '''DBTBS entry:''' no entry | * '''DBTBS entry:''' no entry | ||
| Line 94: | Line 95: | ||
=== Database entries === | === Database entries === | ||
| + | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU08930&redirect=T BSU08930] | ||
* '''Structure:''' [http://www.rcsb.org/pdb/cgi/explore.cgi?pdbId= 4JAK 4JAK] (from ''E. coli'', 45% identity, 72% similarity) {{PubMed|23804755}} | * '''Structure:''' [http://www.rcsb.org/pdb/cgi/explore.cgi?pdbId= 4JAK 4JAK] (from ''E. coli'', 45% identity, 72% similarity) {{PubMed|23804755}} | ||
Revision as of 13:15, 2 April 2014
- Description: similar to tRNA (Um34/Cm34) methyltransferase
| Gene name | cspR |
| Synonyms | ygaR |
| Essential | yes PubMed |
| Product | tRNA (Um34/Cm34) methyltransferase homolog |
| Function | translation |
| Gene expression levels in SubtiExpress: cspR | |
| MW, pI | 18 kDa, 6.054 |
| Gene length, protein length | 480 bp, 160 aa |
| Immediate neighbours | yhbB, yhbD |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU08930
Phenotypes of a mutant
essential PubMed
Database entries
- BsubCyc: BSU08930
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- catalyzes the methyl transfer from S-adenosyl-L-methionine to tRNA(Leu)(CAA) and tRNA(Leu)(UAA) isoacceptors PubMed
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- BsubCyc: BSU08930
- UniProt: O31590
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
