Difference between revisions of "RodZ"
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* '''[[SubtInteract|Interactions]]:''' | * '''[[SubtInteract|Interactions]]:''' | ||
** part of the [[cell wall biosynthetic complex]] {{PubMed|21636744,21636745}} | ** part of the [[cell wall biosynthetic complex]] {{PubMed|21636744,21636745}} | ||
| + | ** [[RodZ]]-[[MreD]] {{PubMed|23879732}} | ||
| + | ** [[RodZ]]-[[MreB]] {{PubMed|23879732}} | ||
| + | ** [[RodZ]]-[[MreBH]] {{PubMed|23879732}} | ||
| + | ** [[RodZ]]-[[Mbl {{PubMed|23879732}} | ||
| − | * '''[[Localization]]:''' membrane protein (according to Swiss Prot) | + | * '''[[Localization]]:''' |
| + | ** membrane protein (according to Swiss Prot) | ||
=== Database entries === | === Database entries === | ||
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=== Additional information=== | === Additional information=== | ||
| − | overexpression results in growth inhibition in minimal medium (in the absence of Mg2+ ) {{PubMed|19164570}} | + | * overexpression results in growth inhibition in minimal medium (in the absence of Mg2+ ) {{PubMed|19164570}} |
| + | * RodZ is destabilized in a ''[[mreB]]'' mutant {{PubMed|23879732}} | ||
=Expression and regulation= | =Expression and regulation= | ||
Revision as of 06:33, 30 July 2013
- Description: required for cell shape determination
| Gene name | rodZ |
| Synonyms | ymfM |
| Essential | may be essential PubMed |
| Product | morphogenic protein |
| Function | required for cell shape determination |
| Gene expression levels in SubtiExpress: rodZ | |
| MW, pI | 23 kDa, 4.679 |
| Gene length, protein length | 639 bp, 213 aa |
| Immediate neighbours | ymfK/2, pgsA |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU16910
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
- membrane protein (according to Swiss Prot)
Database entries
- Structure:
- UniProt: O31771
- KEGG entry: [2]
- E.C. number:
Additional information
- overexpression results in growth inhibition in minimal medium (in the absence of Mg2+ ) PubMed
- RodZ is destabilized in a mreB mutant PubMed
Expression and regulation
- Operon:
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Adriano Henriques, Lisbon, Portugal homepage
Your additional remarks
References
