Difference between revisions of "YugO"
| Line 41: | Line 41: | ||
= [[Categories]] containing this gene/protein = | = [[Categories]] containing this gene/protein = | ||
{{SubtiWiki category|[[transporters/ other]]}}, | {{SubtiWiki category|[[transporters/ other]]}}, | ||
| − | {{SubtiWiki category|[[metal ion homeostasis (K, Na, Ca, Mg)]]}} | + | {{SubtiWiki category|[[metal ion homeostasis (K, Na, Ca, Mg)]]}}, |
| + | {{SubtiWiki category|[[biofilm formation]]}}, | ||
| + | {{SubtiWiki category|[[membrane proteins]]}} | ||
= This gene is a member of the following [[regulons]] = | = This gene is a member of the following [[regulons]] = | ||
| − | + | {{SubtiWiki regulon|[[SinR regulon]]}} | |
=The gene= | =The gene= | ||
| Line 53: | Line 55: | ||
===Phenotypes of a mutant === | ===Phenotypes of a mutant === | ||
| + | * reduced [[biofilm formation]] (can be suppressed by inactivation of ''[[sinR]]'') {{PubMed|23737939}} | ||
=== Database entries === | === Database entries === | ||
Revision as of 12:12, 6 June 2013
- Description: putative potassium channel protein
| Gene name | yugO |
| Synonyms | |
| Essential | no |
| Product | putative potassium channel protein |
| Function | unknown |
| Gene expression levels in SubtiExpress: yugO | |
| MW, pI | 37 kDa, 7.091 |
| Gene length, protein length | 984 bp, 328 aa |
| Immediate neighbours | mstX, yugN |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
transporters/ other, metal ion homeostasis (K, Na, Ca, Mg), biofilm formation, membrane proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU31322
Phenotypes of a mutant
- reduced biofilm formation (can be suppressed by inactivation of sinR) PubMed
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure:
- UniProt: Q795M8
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Matthew E Lundberg, Eric C Becker, Senyon Choe
MstX and a putative potassium channel facilitate biofilm formation in Bacillus subtilis.
PLoS One: 2013, 8(5);e60993
[PubMed:23737939]
[WorldCat.org]
[DOI]
(I e)
