Difference between revisions of "YuiC"

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=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU32070&redirect=T BSU32070]
  
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/yuiC.html]
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/yuiC.html]
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=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU32070&redirect=T BSU32070]
  
 
* '''Structure:'''
 
* '''Structure:'''

Revision as of 14:39, 2 April 2014

  • Description: sporulation protein

Gene name yuiC
Synonyms
Essential no
Product sporulation protein
Function unknown
Gene expression levels in SubtiExpress: yuiC
MW, pI 24 kDa, 8.588
Gene length, protein length 654 bp, 218 aa
Immediate neighbours yuiD, yuiB
Sequences Protein DNA DNA_with_flanks
Genetic context
YuiC context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YuiC expression.png
























Categories containing this gene/protein

sporulation proteins

This gene is a member of the following regulons

CodY regulon, SigF regulon

The gene

Basic information

  • Locus tag: BSU32070

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Operon: yuiC (according to DBTBS)
  • Regulation:
    • expressed early during sporulation in the forespore (SigF) PubMed
    • repressed during growth in the presence of branched chain amino acids (CodY) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Stephanie T Wang, Barbara Setlow, Erin M Conlon, Jessica L Lyon, Daisuke Imamura, Tsutomu Sato, Peter Setlow, Richard Losick, Patrick Eichenberger
The forespore line of gene expression in Bacillus subtilis.
J Mol Biol: 2006, 358(1);16-37
[PubMed:16497325] [WorldCat.org] [DOI] (P p)

Virginie Molle, Yoshiko Nakaura, Robert P Shivers, Hirotake Yamaguchi, Richard Losick, Yasutaro Fujita, Abraham L Sonenshein
Additional targets of the Bacillus subtilis global regulator CodY identified by chromatin immunoprecipitation and genome-wide transcript analysis.
J Bacteriol: 2003, 185(6);1911-22
[PubMed:12618455] [WorldCat.org] [DOI] (P p)

Ulrike Mäder, Georg Homuth, Christian Scharf, Knut Büttner, Rüdiger Bode, Michael Hecker
Transcriptome and proteome analysis of Bacillus subtilis gene expression modulated by amino acid availability.
J Bacteriol: 2002, 184(15);4288-95
[PubMed:12107147] [WorldCat.org] [DOI] (P p)