Difference between revisions of "YokD"
| Line 53: | Line 53: | ||
=== Database entries === | === Database entries === | ||
| + | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU21630&redirect=T BSU21630] | ||
* '''DBTBS entry:''' no entry | * '''DBTBS entry:''' no entry | ||
| Line 90: | Line 91: | ||
=== Database entries === | === Database entries === | ||
| + | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU21630&redirect=T BSU21630] | ||
* '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=2NYG 2NYG], [http://www.rcsb.org/pdb/cgi/explore.cgi?pdbId=3IJW 3IJW] (complex with CoA, from ''B. anthracis'') | * '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=2NYG 2NYG], [http://www.rcsb.org/pdb/cgi/explore.cgi?pdbId=3IJW 3IJW] (complex with CoA, from ''B. anthracis'') | ||
Revision as of 14:00, 2 April 2014
- Description: similar to aminoglycoside N3'-acetyltransferase
| Gene name | yokD |
| Synonyms | |
| Essential | no |
| Product | unknown |
| Function | unknown |
| Gene expression levels in SubtiExpress: yokD | |
| MW, pI | 30 kDa, 6.7 |
| Gene length, protein length | 816 bp, 272 aa |
| Immediate neighbours | yokE, yokC |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
resistance against toxins/ antibiotics, SP-beta prophage
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU21630
Phenotypes of a mutant
Database entries
- BsubCyc: BSU21630
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- BsubCyc: BSU21630
- UniProt: O32003
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Maria M Klimecka, Maksymilian Chruszcz, Jose Font, Tatiana Skarina, Igor Shumilin, Olena Onopryienko, Przemyslaw J Porebski, Marcin Cymborowski, Matthew D Zimmerman, Jeremy Hasseman, Ian J Glomski, Lukasz Lebioda, Alexei Savchenko, Aled Edwards, Wladek Minor
Structural analysis of a putative aminoglycoside N-acetyltransferase from Bacillus anthracis.
J Mol Biol: 2011, 410(3);411-23
[PubMed:21601576]
[WorldCat.org]
[DOI]
(I p)
