Difference between revisions of "GalM"
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=== Database entries === | === Database entries === | ||
| + | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU18360&redirect=T BSU18360] | ||
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/yoxA-dacC.html] | * '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/yoxA-dacC.html] | ||
| Line 94: | Line 95: | ||
=== Database entries === | === Database entries === | ||
| + | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU18360&redirect=T BSU18360] | ||
* '''Structure:''' [http://www.pdb.org/pdb/explore/explore.do?structureId=3MWX 3MWX] | * '''Structure:''' [http://www.pdb.org/pdb/explore/explore.do?structureId=3MWX 3MWX] | ||
Revision as of 13:51, 2 April 2014
- Description: aldose-1-epimerase
| Gene name | galM |
| Synonyms | yoxA |
| Essential | no |
| Product | aldose-1-epimerase (mutarotase) |
| Function | unknown |
| Gene expression levels in SubtiExpress: galM | |
| MW, pI | 37 kDa, 5.602 |
| Gene length, protein length | 975 bp, 325 aa |
| Immediate neighbours | dacC, yoeA |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
utilization of specific carbon sources
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU18360
Phenotypes of a mutant
Database entries
- BsubCyc: BSU18360
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: aldose-1-epimerase (mutarotase) PubMed
- Protein family: peptidase S13 family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
- secreted (according to Swiss-Prot)
Database entries
- BsubCyc: BSU18360
- Structure: 3MWX
- UniProt: P39840
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Colette Duez, Astrid Zervosen, Nathalie Teller, Rémy Melkonian, Emmanuel Banzubazé, Fabrice Bouillenne, André Luxen, Jean-Marie Frère
Characterization of the proteins encoded by the Bacillus subtilis yoxA-dacC operon.
FEMS Microbiol Lett: 2009, 300(1);42-7
[PubMed:19758330]
[WorldCat.org]
[DOI]
(I p)
A Petersohn, J Bernhardt, U Gerth, D Höper, T Koburger, U Völker, M Hecker
Identification of sigma(B)-dependent genes in Bacillus subtilis using a promoter consensus-directed search and oligonucleotide hybridization.
J Bacteriol: 1999, 181(18);5718-24
[PubMed:10482513]
[WorldCat.org]
[DOI]
(P p)
L B Pedersen, T Murray, D L Popham, P Setlow
Characterization of dacC, which encodes a new low-molecular-weight penicillin-binding protein in Bacillus subtilis.
J Bacteriol: 1998, 180(18);4967-73
[PubMed:9733705]
[WorldCat.org]
[DOI]
(P p)
