Difference between revisions of "HmoB"

From SubtiWiki
Jump to: navigation, search
Line 26: Line 26:
 
  <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
 
  <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
 
|-
 
|-
|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yhgC_1083229_1083729_-1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:hmoB_expression.png|500px]]
+
|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yhgC_1083229_1083729_-1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:hmoB_expression.png|500px|link=http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU10100]]
 
|-
 
|-
 
|}
 
|}

Revision as of 12:54, 16 May 2013

  • Description: heme monooxygenase

Gene name hmoB
Synonyms yixC, yhgC
Essential no
Product heme monooxygenase
Function degradation of heme, acquisition of iron
Gene expression levels in SubtiExpress: hmoB
MW, pI 18 kDa, 5.216
Gene length, protein length 498 bp, 166 aa
Immediate neighbours yhgB, pbpF
Sequences Protein DNA DNA_with_flanks
Genetic context
YhgC context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
HmoB expression.png
























Categories containing this gene/protein

acquisition of iron

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU10100

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: binds hemin in vitro with ~1:1 stoichiometry and degrade hemin in the presence of an electron donor PubMed
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
    • constitutively expressed PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Additional references: PubMed