Difference between revisions of "YurJ"
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yurI]]'', ''[[frlR]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yurI]]'', ''[[frlR]]'' | ||
|- | |- | ||
− | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU32550 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU32550 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU32550 | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU32550 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU32550 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU32550 DNA_with_flanks] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:yurJ_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:yurJ_context.gif]] |
Revision as of 11:12, 14 May 2013
- Description: aminosugar ABC transporter (ATP-binding protein)
Gene name | yurJ |
Synonyms | |
Essential | no |
Product | aminosugar ABC transporter (ATP-binding protein) |
Function | uptake of sugar amines |
Gene expression levels in SubtiExpress: yurJ | |
Interactions involving this protein in SubtInteract: YurJ | |
Metabolic function and regulation of this protein in SubtiPathways: Alternative nitrogen sources | |
MW, pI | 41 kDa, 6.071 |
Gene length, protein length | 1101 bp, 367 aa |
Immediate neighbours | yurI, frlR |
Sequences | Protein DNA DNA_with_flanks |
Genetic context This image was kindly provided by SubtiList
| |
Expression at a glance PubMed |
Contents
Categories containing this gene/protein
ABC transporters, utilization of specific carbon sources, utilization of nitrogen sources other than amino acids, membrane proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU32550
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification: phosphorylated on Ser-3 PubMed
- Cofactor(s):
- Effectors of protein activity:
- Localization: membrane associated (via FrlM-FrlN) PubMed
Database entries
- Structure:
- UniProt: O32151
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Sigma factor:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Boumediene Soufi, Chanchal Kumar, Florian Gnad, Matthias Mann, Ivan Mijakovic, Boris Macek
Stable isotope labeling by amino acids in cell culture (SILAC) applied to quantitative proteomics of Bacillus subtilis.
J Proteome Res: 2010, 9(7);3638-46
[PubMed:20509597]
[WorldCat.org]
[DOI]
(I p)
Hannes Hahne, Susanne Wolff, Michael Hecker, Dörte Becher
From complementarity to comprehensiveness--targeting the membrane proteome of growing Bacillus subtilis by divergent approaches.
Proteomics: 2008, 8(19);4123-36
[PubMed:18763711]
[WorldCat.org]
[DOI]
(I p)
Virginie Molle, Yoshiko Nakaura, Robert P Shivers, Hirotake Yamaguchi, Richard Losick, Yasutaro Fujita, Abraham L Sonenshein
Additional targets of the Bacillus subtilis global regulator CodY identified by chromatin immunoprecipitation and genome-wide transcript analysis.
J Bacteriol: 2003, 185(6);1911-22
[PubMed:12618455]
[WorldCat.org]
[DOI]
(P p)
Y Quentin, G Fichant, F Denizot
Inventory, assembly and analysis of Bacillus subtilis ABC transport systems.
J Mol Biol: 1999, 287(3);467-84
[PubMed:10092453]
[WorldCat.org]
[DOI]
(P p)