Difference between revisions of "SqhC"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[dhaS]]'', ''[[sodF]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[dhaS]]'', ''[[sodF]]''
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU19320 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU19320 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU19320 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU19320 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU19320 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU19320 DNA_with_flanks]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:sqhC_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:sqhC_context.gif]]

Revision as of 10:25, 14 May 2013

  • Description: squalene-hopene cyclase, biosynthesis of sporulenes, protection of the spore against oxidative stress PubMed

Gene name sqhC
Synonyms
Essential no
Product squalene-hopene cyclase
Function biosynthesis of sporulenes
Gene expression levels in SubtiExpress: sqhC
MW, pI 71 kDa, 7.633
Gene length, protein length 1896 bp, 632 aa
Immediate neighbours dhaS, sodF
Sequences Protein DNA DNA_with_flanks
Genetic context
SqhC context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
SqhC expression.png
























Categories containing this gene/protein

sporulation proteins, resistance against oxidative and electrophile stress

This gene is a member of the following regulons

SigE regulon

The gene

Basic information

  • Locus tag: BSU19320

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: Squalene = hop-22(29)-ene (according to Swiss-Prot) production of sporulenes, polycyclic terpenoid lipids PubMed
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation: expressed during sporulation in the mother cell PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References