Difference between revisions of "SpoVS"
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ymdB]]'', ''[[tdh]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ymdB]]'', ''[[tdh]]'' | ||
|- | |- | ||
− | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU16980 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU16980 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU16980 | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU16980 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU16980 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU16980 DNA_with_flanks] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:spoVS_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:spoVS_context.gif]] |
Revision as of 10:17, 14 May 2013
- Description: required for dehydratation of the spore core and assembly of the coat, mutation increases SigD-dependent gene expression, might act via SinR
Gene name | spoVS |
Synonyms | |
Essential | no |
Product | unknown |
Function | spore coat assembly, spore core dehydratation |
Gene expression levels in SubtiExpress: spoVS | |
MW, pI | 8 kDa, 6.475 |
Gene length, protein length | 258 bp, 86 aa |
Immediate neighbours | ymdB, tdh |
Sequences | Protein DNA DNA_with_flanks |
Genetic context This image was kindly provided by SubtiList
| |
Expression at a glance PubMed |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU16980
Phenotypes of a mutant
increased SigD-dependent gene expression, this might occur via SinR PubMed
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: P45693
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulatory mechanism:
- Additional information:
- The mRNA has a long 5' leader region. This may indicate RNA-based regulation PubMed
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system: B. pertussis adenylate cyclase-based bacterial two hybrid system (BACTH), available in Stülke lab
- Antibody:
Labs working on this gene/protein
Your additional remarks
References