Difference between revisions of "YkoG"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[thiU]]'', ''[[ykoH]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[thiU]]'', ''[[ykoH]]''
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU13250 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU13250 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU13250 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU13250 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU13250 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU13250 DNA_with_flanks]
 
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Revision as of 10:01, 14 May 2013

Gene name ykoG
Synonyms
Essential no
Product two-component response regulator
Function unknown
Gene expression levels in SubtiExpress: ykoG
Interactions involving this protein in SubtInteract: YkoG
MW, pI 25 kDa, 5.11
Gene length, protein length 684 bp, 228 aa
Immediate neighbours thiU, ykoH
Sequences Protein DNA DNA_with_flanks
Genetic context
YkoG context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YkoG expression.png
























Categories containing this gene/protein

transcription factors and their control, phosphoproteins

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU13250

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: OmpR family of two-component response regulators
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification: phosphorylated by YkoH on an Asp residue
  • Cofactor(s):
  • Effectors of protein activity: phosphorylation likely affects DNA-binding activity

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

C Fabret, V A Feher, J A Hoch
Two-component signal transduction in Bacillus subtilis: how one organism sees its world.
J Bacteriol: 1999, 181(7);1975-83
[PubMed:10094672] [WorldCat.org] [DOI] (P p)