Difference between revisions of "YitB"

From SubtiWiki
Jump to: navigation, search
Line 23: Line 23:
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yitA]]'', ''[[yitC]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yitA]]'', ''[[yitC]]''
 
|-
 
|-
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU10930 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU10930 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU10930 Advanced_DNA]
+
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU10930 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU10930 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU10930 DNA_with_flanks]
 
|-
 
|-
 
|colspan="2" | '''Genetic context''' <br/> [[Image:yitB_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:yitB_context.gif]]

Revision as of 09:53, 14 May 2013

  • Description: phospho-adenylylsulfate sulfotransferase

Gene name yitB
Synonyms
Essential no
Product phospho-adenylylsulfate sulfotransferase
Function sulfate reduction and activation
Gene expression levels in SubtiExpress: yitB
Metabolic function and regulation of this protein in SubtiPathways:
Cys, Met & Sulfate assimilation
MW, pI 27 kDa, 5.77
Gene length, protein length 708 bp, 236 aa
Immediate neighbours yitA, yitC
Sequences Protein DNA DNA_with_flanks
Genetic context
YitB context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YitB expression.png




























Categories containing this gene/protein

sulfur metabolism, sporulation proteins

This gene is a member of the following regulons

SigK regulon

The gene

Basic information

  • Locus tag: BSU10930

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: Adenosine 3',5'-bisphosphate + sulfite + thioredoxin disulfide = 3'-phosphoadenylyl sulfate + thioredoxin (according to Swiss-Prot)
  • Protein family: CysH subfamily (according to Swiss-Prot)
  • Paralogous protein(s): CysH

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]

Additional information

Expression and regulation

  • Regulation:
    • expressed during sporulation in the mother cell (SigK) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References