Difference between revisions of "GsiB"
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ydbA]]'', ''[[ydbB]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ydbA]]'', ''[[ydbB]]'' | ||
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| − | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU04400 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU04400 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU04400 | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU04400 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU04400 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU04400 DNA_with_flanks] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:gsiB_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:gsiB_context.gif]] | ||
Revision as of 09:30, 14 May 2013
- Description: general stress protein
| Gene name | gsiB |
| Synonyms | |
| Essential | no |
| Product | general stress protein |
| Function | unknown |
| Gene expression levels in SubtiExpress: gsiB | |
| MW, pI | 13 kDa, 5.145 |
| Gene length, protein length | 369 bp, 123 aa |
| Immediate neighbours | ydbA, ydbB |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
| |
[None Expression at a glance] PubMed
| |
Contents
Categories containing this gene/protein
general stress proteins (controlled by SigB)
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU04400
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: P26907
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: gsiB PubMed
- Regulatory mechanism:
- Additional information: the mRNA is very stable (half-life > 15 min) PubMed
Biological materials
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Additional publications: PubMed
G Hambraeus, C von Wachenfeldt, L Hederstedt
Genome-wide survey of mRNA half-lives in Bacillus subtilis identifies extremely stable mRNAs.
Mol Genet Genomics: 2003, 269(5);706-14
[PubMed:12884008]
[WorldCat.org]
[DOI]
(P p)
A Petersohn, M Brigulla, S Haas, J D Hoheisel, U Völker, M Hecker
Global analysis of the general stress response of Bacillus subtilis.
J Bacteriol: 2001, 183(19);5617-31
[PubMed:11544224]
[WorldCat.org]
[DOI]
(P p)
B Jürgen, T Schweder, M Hecker
The stability of mRNA from the gsiB gene of Bacillus subtilis is dependent on the presence of a strong ribosome binding site.
Mol Gen Genet: 1998, 258(5);538-45
[PubMed:9669336]
[WorldCat.org]
[DOI]
(P p)
B Maul, U Völker, S Riethdorf, S Engelmann, M Hecker
sigma B-dependent regulation of gsiB in response to multiple stimuli in Bacillus subtilis.
Mol Gen Genet: 1995, 248(1);114-20
[PubMed:7651322]
[WorldCat.org]
[DOI]
(P p)
J P Mueller, G Bukusoglu, A L Sonenshein
Transcriptional regulation of Bacillus subtilis glucose starvation-inducible genes: control of gsiA by the ComP-ComA signal transduction system.
J Bacteriol: 1992, 174(13);4361-73
[PubMed:1378051]
[WorldCat.org]
[DOI]
(P p)
