Difference between revisions of "YciC"

From SubtiWiki
Jump to: navigation, search
Line 22: Line 22:
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yczL]]'', ''[[yckA]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yczL]]'', ''[[yckA]]''
 
|-
 
|-
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU03360 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU03360 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU03360 Advanced_DNA]
+
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU03360 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU03360 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU03360 DNA_with_flanks]
 
|-
 
|-
 
|colspan="2" | '''Genetic context''' <br/> [[Image:yciC_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:yciC_context.gif]]

Revision as of 09:26, 14 May 2013

  • Description: putative metallochaperone

Gene name yciC
Synonyms
Essential no
Product putative metallochaperone
Function zinc uptake
Gene expression levels in SubtiExpress: yciC
MW, pI 45 kDa, 4.399
Gene length, protein length 1191 bp, 397 aa
Immediate neighbours yczL, yckA
Sequences Protein DNA DNA_with_flanks
Genetic context
YciC context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YciC expression.png
























Categories containing this gene/protein

trace metal homeostasis (Cu, Zn, Ni, Mn, Mo), membrane proteins, phosphoproteins

This gene is a member of the following regulons

Zur regulon

The gene

Basic information

  • Locus tag: BSU03360

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: cobW C-terminal domain (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
    • phosphorylated on Arg-58 PubMed
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulatory mechanism:
    • yciA: Zur: transcription repression in the presence of zinc PubMed
    • yciC: Zur: transcription repression in the presence of zinc PubMed
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

John Helmann, Cornell University, USA Homepage

Your additional remarks

References