Difference between revisions of "YofA"
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|style="background:#ABCDEF;" align="center"|'''Function''' || control of ''[[ftsW]]'' expression | |style="background:#ABCDEF;" align="center"|'''Function''' || control of ''[[ftsW]]'' expression | ||
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| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU18420 yofA] |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 31 kDa, 6.164 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 31 kDa, 6.164 | ||
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ggt]]'', ''[[yogA]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ggt]]'', ''[[yogA]]'' | ||
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| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU18420 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU18420 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU18420 Advanced_DNA] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:yofA_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:yofA_context.gif]] | ||
Revision as of 12:58, 13 May 2013
- Description: transcriptional activator of ftsW at the onset of stationary phase
| Gene name | yofA |
| Synonyms | ftsR |
| Essential | no |
| Product | transcriptional activator (LysR family) |
| Function | control of ftsW expression |
| Gene expression levels in SubtiExpress: yofA | |
| MW, pI | 31 kDa, 6.164 |
| Gene length, protein length | 855 bp, 285 aa |
| Immediate neighbours | ggt, yogA |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
transcription factors and their control
This gene is a member of the following regulons
The YofA regulon:
The gene
Basic information
- Locus tag: BSU18420
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: LysR family
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
- secreted (according to Swiss-Prot)
Database entries
- Structure:
- UniProt: O34685
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulation:
- maximally expressed at the onset of stationary phase PubMed
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
