Difference between revisions of "YlmC"
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|style="background:#ABCDEF;" align="center"|'''Function''' || unknown | |style="background:#ABCDEF;" align="center"|'''Function''' || unknown | ||
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| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU15360 ylmC] |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 8 kDa, 5.635 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 8 kDa, 5.635 | ||
| Line 22: | Line 22: | ||
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ylmB]]'', ''[[ylmD]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ylmB]]'', ''[[ylmD]]'' | ||
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| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU15360 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU15360 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU15360 Advanced_DNA] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:ylmC_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:ylmC_context.gif]] | ||
Revision as of 12:46, 13 May 2013
- Description: sporulation protein
| Gene name | ylmC |
| Synonyms | |
| Essential | no |
| Product | sporulation protein |
| Function | unknown |
| Gene expression levels in SubtiExpress: ylmC | |
| MW, pI | 8 kDa, 5.635 |
| Gene length, protein length | 243 bp, 81 aa |
| Immediate neighbours | ylmB, ylmD |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU15360
Phenotypes of a mutant
- a ylmC ymxH double mutant has a severe sporulation defect (1% sporulation as compared to the wild type or single mutants), the block is at stage III of sporulation PubMed
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s): YmxH
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: O31725
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Regulation:
- expressed early during sporulation in the mother cell (SigE, SpoIIID) PubMed
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Ana B Abecasis, Mónica Serrano, Renato Alves, Leonor Quintais, José B Pereira-Leal, Adriano O Henriques
A genomic signature and the identification of new sporulation genes.
J Bacteriol: 2013, 195(9);2101-15
[PubMed:23396918]
[WorldCat.org]
[DOI]
(I p)
Bjorn A Traag, Antonia Pugliese, Jonathan A Eisen, Richard Losick
Gene conservation among endospore-forming bacteria reveals additional sporulation genes in Bacillus subtilis.
J Bacteriol: 2013, 195(2);253-60
[PubMed:23123912]
[WorldCat.org]
[DOI]
(I p)
