Difference between revisions of "FliR"

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|style="background:#ABCDEF;" align="center"|'''Function''' || movement and chemotaxis
 
|style="background:#ABCDEF;" align="center"|'''Function''' || movement and chemotaxis
 
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU16370 fliR]
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU16370 fliR]
 
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 28 kDa, 5.582   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 28 kDa, 5.582   
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[fliQ]]'', ''[[flhB]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[fliQ]]'', ''[[flhB]]''
 
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|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB13510&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU16370 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU16370 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU16370 Advanced_DNA]
 
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Revision as of 12:50, 13 May 2013

  • Description: flagellar protein required for flagellar formation

Gene name fliR
Synonyms
Essential no
Product flagellar protein required for flagellar formation
Function movement and chemotaxis
Gene expression levels in SubtiExpress: fliR
MW, pI 28 kDa, 5.582
Gene length, protein length 777 bp, 259 aa
Immediate neighbours fliQ, flhB
Sequences Protein DNA Advanced_DNA
Genetic context
FliR context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
FliR expression.png















Categories containing this gene/protein

motility and chemotaxis, membrane proteins

This gene is a member of the following regulons

CodY regulon, SigD regulon, Spo0A regulon

The gene

Basic information

  • Locus tag: BSU16370

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

  • A mutation was found in this gene after evolution under relaxed selection for sporulation PubMed

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: fliR/mopE/spaR family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • repressed under conditions that trigger sporulation (Spo0A) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References