Difference between revisions of "FolE2"

From SubtiWiki
Jump to: navigation, search
Line 14: Line 14:
 
|style="background:#ABCDEF;" align="center"|'''Function''' || biosynthesis of folate
 
|style="background:#ABCDEF;" align="center"|'''Function''' || biosynthesis of folate
 
|-
 
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU03340 folE2]
+
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU03340 folE2]
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 34 kDa, 7.831   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 34 kDa, 7.831   
Line 22: Line 22:
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[nasA]]'', ''[[yciB]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[nasA]]'', ''[[yciB]]''
 
|-
 
|-
|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB12128&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
+
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU03340 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU03340 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU03340 Advanced_DNA]
 
|-
 
|-
 
|-
 
|-

Revision as of 12:06, 13 May 2013

  • Description: GTP cyclohydrolase IB, replaces FolE under conditions of zinc starvation

Gene name folE2
Synonyms yciA, folEB
Essential no
Product zinc-independent GTP cyclohydrolase IB
Function biosynthesis of folate
Gene expression levels in SubtiExpress: folE2
MW, pI 34 kDa, 7.831
Gene length, protein length 915 bp, 305 aa
Immediate neighbours nasA, yciB
Sequences Protein DNA Advanced_DNA
Genetic context
YciA context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
FolE2 expression.png
























Categories containing this gene/protein

biosynthesis of cofactors

This gene is a member of the following regulons

Zur regulon

The gene

Basic information

  • Locus tag: BSU03340

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: GTP + H2O = formate + 2-amino-4-hydroxy-6-(erythro-1,2,3-trihydroxypropyl)-dihydropteridine triphosphate (according to Swiss-Prot)
  • Protein family: GTP cyclohydrolase IV family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s): activated by a variety of divalent cations PubMed
  • Effectors of protein activity:

Database entries

  • KEGG entry: [3]

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
    • Zur: transcription repression in the presence of zinc PubMed
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References