Difference between revisions of "PapA"
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|style="background:#ABCDEF;" align="center"|'''Gene name''' | |style="background:#ABCDEF;" align="center"|'''Gene name''' | ||
| − | |'' | + | |''papA'' |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' yqhT'' | |style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' yqhT'' | ||
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|style="background:#ABCDEF;" align="center"|'''Function''' || degradation of proline-containing peptides | |style="background:#ABCDEF;" align="center"|'''Function''' || degradation of proline-containing peptides | ||
|- | |- | ||
| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU24460 | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU24460 papA] |
|- | |- | ||
|colspan="2" style="background:#FAF8CC;" align="center"| '''Metabolic function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/pathways/other_nitrogen_sources/index.html Alternative nitrogen sources]''' | |colspan="2" style="background:#FAF8CC;" align="center"| '''Metabolic function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/pathways/other_nitrogen_sources/index.html Alternative nitrogen sources]''' | ||
| Line 73: | Line 73: | ||
* '''Protein family:''' peptidase M24B family (according to Swiss-Prot) | * '''Protein family:''' peptidase M24B family (according to Swiss-Prot) | ||
| − | * '''Paralogous protein(s):''' [[ | + | * '''Paralogous protein(s):''' [[PapB]] |
=== Extended information on the protein === | === Extended information on the protein === | ||
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* '''Operon:''' | * '''Operon:''' | ||
| − | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yqhT_2538697_2539758_-1 | + | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yqhT_2538697_2539758_-1 papA] {{PubMed|22383849}} |
* '''Sigma factor:''' | * '''Sigma factor:''' | ||
Revision as of 11:35, 14 November 2012
- Description: Xaa-Pro amino-peptidases
| Gene name | papA |
| Synonyms | yqhT |
| Essential | no |
| Product | Xaa-Pro amino-peptidases |
| Function | degradation of proline-containing peptides |
| Gene expression levels in SubtiExpress: papA | |
| Metabolic function and regulation of this protein in SubtiPathways: Alternative nitrogen sources | |
| MW, pI | 37 kDa, 4.83 |
| Gene length, protein length | 1059 bp, 353 aa |
| Immediate neighbours | efp, yqhS |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
utilization of nitrogen sources other than amino acids, coping with hyper-osmotic stress
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU24460
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: peptidase M24B family (according to Swiss-Prot)
- Paralogous protein(s): PapB
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
- cytoplasm (according to Swiss-Prot)
Database entries
- Structure: 3Q6D (the B. anthracis enzyme, 65% identity, 82% similarity)
- UniProt: P54518
- KEGG entry: [2]
- E.C. number: 3.4.11.9
Additional information
Expression and regulation
- Operon:
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant: available in the Erhard Bremer lab
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Erhard Bremer, Marburg University, Germany Homepage
Your additional remarks
References
