Difference between revisions of "YktC"
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|style="background:#ABCDEF;" align="center"|'''Function''' || unknown | |style="background:#ABCDEF;" align="center"|'''Function''' || unknown | ||
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| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU14670 yktC] |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 29 kDa, 5.087 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 29 kDa, 5.087 | ||
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ykzI]]'', ''[[ykzC]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ykzI]]'', ''[[ykzC]]'' | ||
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| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU14670 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU14670 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU14670 Advanced_DNA] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:yktC_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:yktC_context.gif]] | ||
Revision as of 12:43, 13 May 2013
- Description: unknown
| Gene name | yktC |
| Synonyms | suhB |
| Essential | no |
| Product | unknown |
| Function | unknown |
| Gene expression levels in SubtiExpress: yktC | |
| MW, pI | 29 kDa, 5.087 |
| Gene length, protein length | 795 bp, 265 aa |
| Immediate neighbours | ykzI, ykzC |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
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Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU14670
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: Myo-inositol phosphate + H2O = myo-inositol + phosphate (according to Swiss-Prot)
- Protein family: inositol monophosphatase family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: Q45499
- KEGG entry: [2]
- E.C. number: 3.1.3.25
Additional information
The gene is annotated in Swiss-Prot and KEGG as myo-inositol-1(or 4)-monophosphatase EC 3.1.3.25. In MetaCyc it is annotated as “similar to myo-inositol-1(or 4)-monophosphatase”. No literature/experimental evidence supporting the annotation is available. PubMed
Expression and regulation
- Operon:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Tzu-Lin Hsiao, Olga Revelles, Lifeng Chen, Uwe Sauer, Dennis Vitkup
Automatic policing of biochemical annotations using genomic correlations.
Nat Chem Biol: 2010, 6(1);34-40
[PubMed:19935659]
[WorldCat.org]
[DOI]
(I p)
