Difference between revisions of "YkuI"
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− | * '''Mutant:''' GP1324 (tet) available in [[Stülke]] lab | + | * '''Mutant:''' GP1324 (tet), available in [[Stülke]] lab |
* '''Expression vector:''' | * '''Expression vector:''' |
Revision as of 11:38, 30 October 2012
- Description: potential c-di-GMP degrading phosphodiesterase
Gene name | ykuI |
Synonyms | |
Essential | no |
Product | potential c-di-GMP degrading phosphodiesterase |
Function | unknown |
Gene expression levels in SubtiExpress: ykuI | |
MW, pI | 47 kDa, 4.462 |
Gene length, protein length | 1221 bp, 407 aa |
Immediate neighbours | ykuH, fsrA |
Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context This image was kindly provided by SubtiList
| |
Expression at a glance PubMed |
Contents
Categories containing this gene/protein
metabolism of signalling nucleotides
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU14090
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: degradation of cyclic di-GMP PubMed
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains: EAL domain (aa 1 ... 245, for c-di-GMP hydrolysis), PAS-like domain (aa 300 ... 400) PubMed
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- UniProt: O35014
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant: GP1324 (tet), available in Stülke lab
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Additional publications: PubMed