Difference between revisions of "XylB"

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(Expression and regulation)
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=Expression and regulation=
 
=Expression and regulation=
  
* '''Operon:'''  
+
* '''Operon:''' ''[[xylA]]-[[xylB]]''
  
* '''Sigma factor:'''  
+
* '''Sigma factor:''' [[SigA]]
  
* '''Regulation:'''  
+
* '''Regulation:''' carbon catabolite repression ([[CcpA]]), induction by xylose ([[XylR]])
  
* '''Regulatory mechanism:'''  
+
* '''Regulatory mechanism:''' [[CcpA]]: transcription repression, [[XylR]]: transcription repression
  
* '''Additional information:'''  
+
* '''Additional information:'''
  
 
=Biological materials =
 
=Biological materials =

Revision as of 20:47, 15 February 2009

  • Description: xylulose kinase

Gene name xylB
Synonyms yncA
Essential no
Product xylulose kinase (EC 2.7.1.17)
Function xylose and xylan utilization
MW, pI 55 kDa, 6.459
Gene length, protein length 1497 bp, 499 aa
Immediate neighbours
Gene sequence (+200bp) Protein sequence
Genetic context
XylB context.gif



The gene

Basic information

  • Coordinates:

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • Swiss prot entry:
  • KEGG entry:
  • E.C. number:

Additional information

Expression and regulation

  • Regulation: carbon catabolite repression (CcpA), induction by xylose (XylR)
  • Regulatory mechanism: CcpA: transcription repression, XylR: transcription repression
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

  1. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed