Difference between revisions of "PepF"
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|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 1827 bp, 609 aa | |style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 1827 bp, 609 aa | ||
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− | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[coiA]]'', ''[[ | + | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[coiA]]'', ''[[yizD]]'' |
|- | |- | ||
|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+[EMBLCDS:CAB13011]+-newId sequences] <br/> (Barbe ''et al.'', 2009)''' | |colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+[EMBLCDS:CAB13011]+-newId sequences] <br/> (Barbe ''et al.'', 2009)''' |
Revision as of 08:21, 30 November 2012
- Description: oligoendopeptidase, inhibits sporulation upon overexpression
Gene name | pepF |
Synonyms | yjbG |
Essential | no |
Product | oligoendopeptidase |
Function | protein degradation |
Gene expression levels in SubtiExpress: pepF | |
MW, pI | 69 kDa, 5.131 |
Gene length, protein length | 1827 bp, 609 aa |
Immediate neighbours | coiA, yizD |
Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context This image was kindly provided by SubtiList
| |
Expression at a glance PubMed |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU11540
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: peptidase M3B family (according to Swiss-Prot)
- Paralogous protein(s): YusX
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: O31605
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Kyoko Kanamaru, Sophie Stephenson, Marta Perego
Overexpression of the PepF oligopeptidase inhibits sporulation initiation in Bacillus subtilis.
J Bacteriol: 2002, 184(1);43-50
[PubMed:11741842]
[WorldCat.org]
[DOI]
(P p)