Difference between revisions of "SigD regulon"

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(Genes in this regulon)
(Genes in this regulon)
Line 5: Line 5:
 
= Genes in this [[regulon]] =
 
= Genes in this [[regulon]] =
 
* as-''[[gdpP]]''
 
* as-''[[gdpP]]''
* ''[[cheA]]''
 
* ''[[cheB]]''
 
* ''[[cheC]]''
 
* ''[[cheD]]''
 
 
* ''[[cheV]]''
 
* ''[[cheV]]''
* ''[[cheW]]''
 
* ''[[cheY]]''
 
 
* ''[[cwlQ]]''
 
* ''[[cwlQ]]''
 
* ''[[cwlS]]''
 
* ''[[cwlS]]''
Line 21: Line 15:
 
* ''[[dltE]]''
 
* ''[[dltE]]''
 
* ''[[epr]]''
 
* ''[[epr]]''
* ''[[flgB]]''
+
* ''[[flgB]]-[[flgC]]-[[fliE]]-[[fliF]]-[[fliG]]-[[fliH]]-[[fliI]]-[[fliJ]]-[[ylxF]]-[[fliK]]-[[flgD]]-[[flgE]]-[[fliL]]-[[fliM]]-[[fliY]]-[[cheY]]-[[fliZ]]-[[fliP]]-[[fliQ]]-[[fliR]]-[[flhB]]-[[flhA]]-[[flhF]]-[[flhG]]-[[cheB]]-[[cheA]]-[[cheW]]-[[cheC]]-[[cheD]]-[[sigD]]-[[swrB]]''
* ''[[flgC]]''
 
* ''[[flgD]]''
 
* ''[[flgE]]''
 
 
* ''[[flgK]]''
 
* ''[[flgK]]''
 
* ''[[flgL]]''
 
* ''[[flgL]]''
 
* ''[[flgM]]''
 
* ''[[flgM]]''
* ''[[flhA]]''
 
* ''[[flhB]]''
 
* ''[[flhF]]''
 
 
* ''[[flhO]]''
 
* ''[[flhO]]''
 
* ''[[flhP]]''
 
* ''[[flhP]]''
 
* ''[[fliD]]''
 
* ''[[fliD]]''
* ''[[fliE]]''
 
* ''[[fliF]]''
 
* ''[[fliG]]''
 
* ''[[fliH]]''
 
* ''[[fliI]]''
 
* ''[[fliJ]]''
 
* ''[[fliK]]''
 
* ''[[fliL]]''
 
* ''[[fliM]]''
 
* ''[[fliP]]''
 
* ''[[fliQ]]''
 
* ''[[fliR]]''
 
 
* ''[[fliS]]''
 
* ''[[fliS]]''
 
* ''[[fliT]]''
 
* ''[[fliT]]''
* ''[[fliY]]''
 
* ''[[fliZ]]''
 
 
* ''[[hag]]''
 
* ''[[hag]]''
 
* ''[[hemAT]]''
 
* ''[[hemAT]]''
Line 65: Line 39:
 
* ''[[pgdS]]''
 
* ''[[pgdS]]''
 
* ''[[sigA]]''
 
* ''[[sigA]]''
* ''[[sigD]]''
 
* ''[[swrB]]''
 
 
* ''[[tlpA]]''
 
* ''[[tlpA]]''
 
* ''[[tlpB]]''
 
* ''[[tlpB]]''
Line 77: Line 49:
 
* ''[[yjfB]]''
 
* ''[[yjfB]]''
 
* ''[[ylqB]]''
 
* ''[[ylqB]]''
* ''[[ylxF]]''
 
* ''[[ylxH]]''
 
 
* ''[[yoaH]]''
 
* ''[[yoaH]]''
 
* ''[[yscB]]''
 
* ''[[yscB]]''

Revision as of 18:24, 30 November 2012

Regulator

SigD

Genes in this regulon

Comments

    • the SigD regulon is strongly overexpressed in a ymdB mutant (loss of bistable gene expression) PubMed

Important publications on the SigD regulon

Diethmaier C, Pietack N, Gunka K, Wrede C, Lehnik-Habrink M, Herzberg C, Hübner S, Stülke J  
A Novel Factor Controlling Bistability in Bacillus subtilis: The YmdB Protein Affects
Flagellin Expression and Biofilm Formation. 
J Bacteriol.: 2011, 193(21):5997-6007. 
PubMed:21856853

Masakuni Serizawa, Hiroki Yamamoto, Hirotake Yamaguchi, Yasutaro Fujita, Kazuo Kobayashi, Naotake Ogasawara, Junichi Sekiguchi
Systematic analysis of SigD-regulated genes in Bacillus subtilis by DNA microarray and Northern blotting analyses.
Gene: 2004, 329;125-36
[PubMed:15033535] [WorldCat.org] [DOI] (P p)

L M Márquez, J D Helmann, E Ferrari, H M Parker, G W Ordal, M J Chamberlin
Studies of sigma D-dependent functions in Bacillus subtilis.
J Bacteriol: 1990, 172(6);3435-43
[PubMed:2111808] [WorldCat.org] [DOI] (P p)


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