Difference between revisions of "YcnI"

From SubtiWiki
Jump to: navigation, search
(Expression and regulation)
Line 109: Line 109:
 
* '''Regulation:'''  
 
* '''Regulation:'''  
 
** induced by copper limitation ([[YcnK]]) {{PubMed|22904286}}
 
** induced by copper limitation ([[YcnK]]) {{PubMed|22904286}}
 +
** induction of the ''[[ycnK]]-[[ycnJ]]-[[ycnI]]'' in a ''[[csoR]]'' mutant results from intracellular copper depletion due to the constitutive expression of the ''[[copZ]]-[[copA]]'' operon (copper export) {{PubMed|22904286}}
  
 
* '''Regulatory mechanism:'''  
 
* '''Regulatory mechanism:'''  

Revision as of 08:19, 23 August 2012

  • Description: unknown

Gene name ycnI
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: ycnI
MW, pI 21 kDa, 4.834
Gene length, protein length 612 bp, 204 aa
Immediate neighbours gdh, ycnJ
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YcnI context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YcnI expression.png















Categories containing this gene/protein

membrane proteins, proteins of unknown function

This gene is a member of the following regulons

YcnK regulon

The gene

Basic information

  • Locus tag: BSU03940

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • induced by copper limitation (YcnK) PubMed
    • induction of the ycnK-ycnJ-ycnI in a csoR mutant results from intracellular copper depletion due to the constitutive expression of the copZ-copA operon (copper export) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References