Difference between revisions of "YdiG"
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| − | * '''Description:''' | + | * '''Description:''' molybdenum cofactor biosynthesis protein <br/><br/> |
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|style="background:#ABCDEF;" align="center"| '''Essential''' || no | |style="background:#ABCDEF;" align="center"| '''Essential''' || no | ||
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| − | |style="background:#ABCDEF;" align="center"| '''Product''' || | + | |style="background:#ABCDEF;" align="center"| '''Product''' || molybdenum cofactor biosynthesis protein |
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|style="background:#ABCDEF;" align="center"|'''Function''' || unknown | |style="background:#ABCDEF;" align="center"|'''Function''' || unknown | ||
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<br/><br/><br/><br/> | <br/><br/><br/><br/> | ||
<br/><br/><br/><br/> | <br/><br/><br/><br/> | ||
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<br/><br/> | <br/><br/> | ||
= [[Categories]] containing this gene/protein = | = [[Categories]] containing this gene/protein = | ||
| − | {{SubtiWiki category|[[ | + | {{SubtiWiki category|[[biosynthesis of cofactors]]}} |
= This gene is a member of the following [[regulons]] = | = This gene is a member of the following [[regulons]] = | ||
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=== Additional information=== | === Additional information=== | ||
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* '''Catalyzed reaction/ biological activity:''' | * '''Catalyzed reaction/ biological activity:''' | ||
| + | ** involved in the first step of molybdenum cofactor biosynthesis (together with [[MoaA]]) | ||
* '''Protein family:''' moaC family (according to Swiss-Prot) | * '''Protein family:''' moaC family (according to Swiss-Prot) | ||
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=== Database entries === | === Database entries === | ||
| − | * '''Structure:''' | + | * '''Structure:''' [http://www.rcsb.org/pdb/explore/explore.do?pdbId=1EKR 1EKR] (the protein from ''E. coli'', 51% identity, 78% similarity) {{PubMed|10903949}} |
* '''UniProt:''' [http://www.uniprot.org/uniprot/O05520 O05520] | * '''UniProt:''' [http://www.uniprot.org/uniprot/O05520 O05520] | ||
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=Expression and regulation= | =Expression and regulation= | ||
| − | * '''Operon:''' | + | * '''Operon:''' ''[[ydiG]]-[[rex]]-[[tatAY]]-[[tatCY]]'' {{PubMed|22383849}} |
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=moaC_646582_647094_1 ydiG] {{PubMed|22383849}} | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=moaC_646582_647094_1 ydiG] {{PubMed|22383849}} | ||
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=References= | =References= | ||
| − | + | <pubmed> 10903949 22383849</pubmed> | |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 09:08, 28 August 2012
- Description: molybdenum cofactor biosynthesis protein
| Gene name | ydiG |
| Synonyms | |
| Essential | no |
| Product | molybdenum cofactor biosynthesis protein |
| Function | unknown |
| Gene expression levels in SubtiExpress: ydiG | |
| MW, pI | 18 kDa, 6.222 |
| Gene length, protein length | 510 bp, 170 aa |
| Immediate neighbours | ydiF, rex |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU05960
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- involved in the first step of molybdenum cofactor biosynthesis (together with MoaA)
- Protein family: moaC family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- UniProt: O05520
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
