Difference between revisions of "YceE"

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|style="background:#ABCDEF;" align="center"|'''Function''' || required for survival of ethanol stress and <br/>at low temperatures
 
|style="background:#ABCDEF;" align="center"|'''Function''' || required for survival of ethanol stress and <br/>at low temperatures
 
|-
 
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU02910 yceE]
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU02910 yceE]
 
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 20 kDa, 4.391   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 20 kDa, 4.391   
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yceD]]'', ''[[yceF]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yceD]]'', ''[[yceF]]''
 
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|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB12085&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU02910 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU02910 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU02910 Advanced_DNA]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:yceE_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:yceE_context.gif]]

Revision as of 12:05, 13 May 2013

  • Description: general stress protein, similar to tellurium resistance protein

Gene name yceE
Synonyms
Essential no
Product unknown
Function required for survival of ethanol stress and
at low temperatures
Gene expression levels in SubtiExpress: yceE
MW, pI 20 kDa, 4.391
Gene length, protein length 576 bp, 192 aa
Immediate neighbours yceD, yceF
Sequences Protein DNA Advanced_DNA
Genetic context
YceE context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YceE expression.png
















Categories containing this gene/protein

general stress proteins (controlled by SigB), cell envelope stress proteins (controlled by SigM, V, W, X, Y), resistance against toxic metals, phosphoproteins

This gene is a member of the following regulons

SigB regulon, SigM regulon, SigW regulon, Sigx regulon

The gene

Basic information

  • Locus tag: BSU02910

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: CAPAB/terDEXZ family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
    • phosphorylated on Arg-10 PubMed
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References