Difference between revisions of "RplW"

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|style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' ''
 
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' ''
 
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|style="background:#ABCDEF;" align="center"| '''Essential''' || yes [http://www.ncbi.nlm.nih.gov/pubmed/12682299 PubMed]
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|style="background:#ABCDEF;" align="center"| '''Essential''' || no {{PubMed|23002217}}
 
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|style="background:#ABCDEF;" align="center"| '''Product''' || [[ribosomal protein]] L23
 
|style="background:#ABCDEF;" align="center"| '''Product''' || [[ribosomal protein]] L23
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= [[Categories]] containing this gene/protein =
 
= [[Categories]] containing this gene/protein =
 
{{SubtiWiki category|[[translation]]}},
 
{{SubtiWiki category|[[translation]]}},
{{SubtiWiki category|[[essential genes]]}},
 
 
{{SubtiWiki category|[[membrane proteins]]}},
 
{{SubtiWiki category|[[membrane proteins]]}},
 
{{SubtiWiki category|[[phosphoproteins]]}}
 
{{SubtiWiki category|[[phosphoproteins]]}}
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===Phenotypes of a mutant ===
 
===Phenotypes of a mutant ===
 
essential [http://www.ncbi.nlm.nih.gov/pubmed/12682299 PubMed]
 
  
 
=== Database entries ===
 
=== Database entries ===
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=References=
 
=References=
 
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'''Additional publications:''' {{PubMed|23002217}}
 
<pubmed>18763711, 19653700 9371452 11948165 8635744 22517742</pubmed>
 
<pubmed>18763711, 19653700 9371452 11948165 8635744 22517742</pubmed>
  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 10:50, 26 September 2012

Gene name rplW
Synonyms
Essential no PubMed
Product ribosomal protein L23
Function translation
Gene expression levels in SubtiExpress: rplW
Interactions involving this protein in SubtInteract: RplW
MW, pI 10 kDa, 10.087
Gene length, protein length 285 bp, 95 aa
Immediate neighbours rplD, rplB
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
RplW context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
RplW expression.png

















Categories containing this gene/protein

translation, membrane proteins, phosphoproteins

This gene is a member of the following regulons

stringent response

The gene

Basic information

  • Locus tag: BSU01180

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
    • phosphorylated on Arg-10 PubMed
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
    • SigA two promoters, about 140bp and 200bp upstream of the start codon PubMed
  • Regulation:
    • RelA dependent downregulation (Class I) during stringent response PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Additional publications: PubMed