Difference between revisions of "CsbC"
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU39810 csbC] | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU39810 csbC] | ||
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| + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/CsbC CsbC] | ||
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 49 kDa, 9.943 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 49 kDa, 9.943 | ||
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* '''Domains:''' | * '''Domains:''' | ||
| + | ** contains 12 trans-membrane domains {{PubMed|23180473}} | ||
* '''Modification:''' | * '''Modification:''' | ||
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* '''[[SubtInteract|Interactions]]:''' | * '''[[SubtInteract|Interactions]]:''' | ||
** [[CsbC]] is a member of a suspected group of hubs proteins that were suggested to be involved in a large number of [[SubtInteract|interactions]] {{PubMed|21630458}} | ** [[CsbC]] is a member of a suspected group of hubs proteins that were suggested to be involved in a large number of [[SubtInteract|interactions]] {{PubMed|21630458}} | ||
| + | ** [[CsbC]]-[[TatAD]] {{PubMed|23180473}} | ||
| + | ** [[CsbC]]-[[TatCD]] {{PubMed|23180473}} | ||
| − | * '''[[Localization]]:''' cell membrane | + | * '''[[Localization]]:''' |
| + | ** homogeneously distributed in the cell membrane {{PubMed|23180473}} | ||
=== Database entries === | === Database entries === | ||
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=References= | =References= | ||
| − | <pubmed>10376822,21630458,15805528, </pubmed> | + | <pubmed>10376822,21630458,15805528, 23180473</pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 09:32, 30 November 2012
- Description: general stress protein, similar to pentose transporter
| Gene name | csbC |
| Synonyms | yxcC |
| Essential | no |
| Product | putative pentose transporter |
| Function | unknown |
| Gene expression levels in SubtiExpress: csbC | |
| Interactions involving this protein in SubtInteract: CsbC | |
| MW, pI | 49 kDa, 9.943 |
| Gene length, protein length | 1383 bp, 461 aa |
| Immediate neighbours | yxcD, htpG |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
transporters/ other, general stress proteins (controlled by SigB), membrane proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU39810
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- contains 12 trans-membrane domains PubMed
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
- homogeneously distributed in the cell membrane PubMed
Database entries
- Structure:
- UniProt: P46333
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Carmine G Monteferrante, Calum MacKichan, Elodie Marchadier, Maria-Victoria Prejean, Rut Carballido-López, Jan Maarten van Dijl
Mapping the twin-arginine protein translocation network of Bacillus subtilis.
Proteomics: 2013, 13(5);800-11
[PubMed:23180473]
[WorldCat.org]
[DOI]
(I p)
Elodie Marchadier, Rut Carballido-López, Sophie Brinster, Céline Fabret, Peggy Mervelet, Philippe Bessières, Marie-Françoise Noirot-Gros, Vincent Fromion, Philippe Noirot
An expanded protein-protein interaction network in Bacillus subtilis reveals a group of hubs: Exploration by an integrative approach.
Proteomics: 2011, 11(15);2981-91
[PubMed:21630458]
[WorldCat.org]
[DOI]
(I p)
Dirk Höper, Uwe Völker, Michael Hecker
Comprehensive characterization of the contribution of individual SigB-dependent general stress genes to stress resistance of Bacillus subtilis.
J Bacteriol: 2005, 187(8);2810-26
[PubMed:15805528]
[WorldCat.org]
[DOI]
(P p)
Samina Akbar, Soon Youl Lee, Sharon A Boylan, Chester W Price
Two genes from Bacillus subtilis under the sole control of the general stress transcription factor sigmaB.
Microbiology (Reading): 1999, 145 ( Pt 5);1069-1078
[PubMed:10376822]
[WorldCat.org]
[DOI]
(P p)
