Difference between revisions of "ArfM"
| Line 14: | Line 14: | ||
|style="background:#ABCDEF;" align="center"|'''Function''' || regulation of anaerobic genes | |style="background:#ABCDEF;" align="center"|'''Function''' || regulation of anaerobic genes | ||
|- | |- | ||
| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU37290 arfM] |
|- | |- | ||
|colspan="2" style="background:#FAF8CC;" align="center"| '''Metabolic function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/pathways/carbon_flow.html Central C-metabolism], [http://subtiwiki.uni-goettingen.de/pathways/stress_response.html Stress]''' | |colspan="2" style="background:#FAF8CC;" align="center"| '''Metabolic function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/pathways/carbon_flow.html Central C-metabolism], [http://subtiwiki.uni-goettingen.de/pathways/stress_response.html Stress]''' | ||
| Line 24: | Line 24: | ||
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[narG]]'', ''[[ywiC]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[narG]]'', ''[[ywiC]]'' | ||
|- | |- | ||
| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU37290 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU37290 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU37290 Advanced_DNA] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:arfM_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:arfM_context.gif]] | ||
Revision as of 14:06, 13 May 2013
- Description: regulation of anaerobic genes
| Gene name | arfM |
| Synonyms | ywiD |
| Essential | no |
| Product | unknown |
| Function | regulation of anaerobic genes |
| Gene expression levels in SubtiExpress: arfM | |
| Metabolic function and regulation of this protein in SubtiPathways: Central C-metabolism, Stress | |
| MW, pI | 17 kDa, 5.842 |
| Gene length, protein length | 474 bp, 158 aa |
| Immediate neighbours | narG, ywiC |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
regulators of electron transport, transcription factors and their control
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU37290
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: P46910
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: arfM PubMed
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Heike Reents, Richard Münch, Thorben Dammeyer, Dieter Jahn, Elisabeth Härtig
The Fnr regulon of Bacillus subtilis.
J Bacteriol: 2006, 188(3);1103-12
[PubMed:16428414]
[WorldCat.org]
[DOI]
(P p)
M Marino, H C Ramos, T Hoffmann, P Glaser, D Jahn
Modulation of anaerobic energy metabolism of Bacillus subtilis by arfM (ywiD).
J Bacteriol: 2001, 183(23);6815-21
[PubMed:11698370]
[WorldCat.org]
[DOI]
(P p)
H Cruz Ramos, L Boursier, I Moszer, F Kunst, A Danchin, P Glaser
Anaerobic transcription activation in Bacillus subtilis: identification of distinct FNR-dependent and -independent regulatory mechanisms.
EMBO J: 1995, 14(23);5984-94
[PubMed:8846791]
[WorldCat.org]
[DOI]
(P p)
