Difference between revisions of "AppF"

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* '''Description:''' oligopeptide [[ABC transporter]] (ATP-binding protein) <br/><br/>
 
 
 
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Revision as of 11:09, 9 August 2012

Gene name appF
Synonyms
Essential no
Product oligopeptide ABC transporter (ATP-binding protein))
Function uptake of oligopeptides
Gene expression levels in SubtiExpress: appF
Interactions involving this protein in SubtInteract: AppF
Metabolic function and regulation of this protein in SubtiPathways:
Alternative nitrogen sources
MW, pI 36 kDa, 9.645
Gene length, protein length 987 bp, 329 aa
Immediate neighbours appD, appA/1
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
AppF context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
AppF expression.png
























Categories containing this gene/protein

ABC transporters, utilization of nitrogen sources other than amino acids, membrane proteins

This gene is a member of the following regulons

CodY regulon, ScoC regulon

The gene

Basic information

  • Locus tag: BSU11370

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
    • repressed during exponential growth (ScoC) PubMed
    • repressed during growth in the presence of branched chain amino acids (CodY) PubMed
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References