YqiK

• Description: cytoplasmic glycerophosphodiester phosphodiesterase
  
  

Gene name	yqiK
Synonyms
Essential	no
Product	cytoplasmic glycerophosphodiester phosphodiesterase
Function	unknown
Gene expression levels in SubtiExpress: yqiK
MW, pI	26 kDa, 6.432
Gene length, protein length	717 bp, 239 aa
Immediate neighbours	mmgA, yqiI
Get the DNA and protein sequences (Barbe et al., 2009)
Genetic context This image was kindly provided by SubtiList
Expression at a glance   PubMed

Categories containing this gene/protein

utilization of lipids

The gene

Basic information

• Locus tag: BSU24180

Database entries

• DBTBS entry: no entry

• SubtiList entry: [1]

The protein

Basic information/ Evolution

• Catalyzed reaction/ biological activity:

• Protein family:

• Paralogous protein(s): GlpQ, YhdW

Extended information on the protein

• Kinetic information:

• Domains:

• Modification:

• Cofactor(s):

• Effectors of protein activity:

• Interactions:

• Localization:
  • cytoplasm (according to Swiss-Prot)

Database entries

• Structure:

• UniProt: P54527

• KEGG entry: [2]

• E.C. number:

Expression and regulation

• Operon:
  • yqiH-yqiI-yqiK PubMed
  • yqiK PubMed

• Expression browser: yqiK PubMed

• Sigma factor: SigA PubMed

• Regulation:
  • only expressed under conditions of high osmolarity PubMed

• Regulatory mechanism:

• Additional information:

Biological materials

• Mutant:

• Expression vector:

• lacZ fusion:

• GFP fusion:

• two-hybrid system:

• Antibody:

References

Kathleen E Fischer, Erhard Bremer
Activity of the osmotically regulated yqiHIK promoter from Bacillus subtilis is controlled at a distance.
J Bacteriol: 2012, 194(19);5197-208
[PubMed:22843846] [WorldCat.org] [DOI] (I p)

Pierre Nicolas, Ulrike Mäder, Etienne Dervyn, Tatiana Rochat, Aurélie Leduc, Nathalie Pigeonneau, Elena Bidnenko, Elodie Marchadier, Mark Hoebeke, Stéphane Aymerich, Dörte Becher, Paola Bisicchia, Eric Botella, Olivier Delumeau, Geoff Doherty, Emma L Denham, Mark J Fogg, Vincent Fromion, Anne Goelzer, Annette Hansen, Elisabeth Härtig, Colin R Harwood, Georg Homuth, Hanne Jarmer, Matthieu Jules, Edda Klipp, Ludovic Le Chat, François Lecointe, Peter Lewis, Wolfram Liebermeister, Anika March, Ruben A T Mars, Priyanka Nannapaneni, David Noone, Susanne Pohl, Bernd Rinn, Frank Rügheimer, Praveen K Sappa, Franck Samson, Marc Schaffer, Benno Schwikowski, Leif Steil, Jörg Stülke, Thomas Wiegert, Kevin M Devine, Anthony J Wilkinson, Jan Maarten van Dijl, Michael Hecker, Uwe Völker, Philippe Bessières, Philippe Noirot
Condition-dependent transcriptome reveals high-level regulatory architecture in Bacillus subtilis.
Science: 2012, 335(6072);1103-6
[PubMed:22383849] [WorldCat.org] [DOI] (I p)