Difference between revisions of "YceE"

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{{SubtiWiki regulon|[[SigB regulon]]}},
 
{{SubtiWiki regulon|[[SigB regulon]]}},
 
{{SubtiWiki regulon|[[SigM regulon]]}},
 
{{SubtiWiki regulon|[[SigM regulon]]}},
{{SubtiWiki regulon|[[SigW regulon]]}}
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{{SubtiWiki regulon|[[SigW regulon]]}},
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{{SubtiWiki regulon|[[Sigx regulon]]}}
  
 
=The gene=
 
=The gene=
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yceE_313396_313974_1 yceE] {{PubMed|22383849}}
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yceE_313396_313974_1 yceE] {{PubMed|22383849}}
  
* '''Sigma factor:''' [[SigB]] [http://www.ncbi.nlm.nih.gov/pubmed/15805528 PubMed], [[SigM]] {{PubMed|18179421}}, [[SigW]] {{PubMed|11866510}}   
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* '''Sigma factor:''' [[SigB]] [http://www.ncbi.nlm.nih.gov/pubmed/15805528 PubMed], [[SigM]] {{PubMed|18179421}}, [[SigW]] {{PubMed|11866510}}, [[SigX]] {{PubMed|19047346}}   
  
 
* '''Regulation:'''  induced by stress ([[SigB]]) [http://www.ncbi.nlm.nih.gov/pubmed/15805528 PubMed]
 
* '''Regulation:'''  induced by stress ([[SigB]]) [http://www.ncbi.nlm.nih.gov/pubmed/15805528 PubMed]
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=References=
 
=References=
  
<pubmed>15805528, 11866510 18179421 22517742</pubmed>
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<pubmed>15805528, 11866510 18179421 19047346 22517742</pubmed>
  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 20:12, 21 July 2012

  • Description: general stress protein, similar to tellurium resistance protein

Gene name yceE
Synonyms
Essential no
Product unknown
Function required for survival of ethanol stress and
at low temperatures
MW, pI 20 kDa, 4.391
Gene length, protein length 576 bp, 192 aa
Immediate neighbours yceD, yceF
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YceE context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YceE expression.png
















Categories containing this gene/protein

general stress proteins (controlled by SigB), cell envelope stress proteins (controlled by SigM, V, W, X, Y), resistance against toxic metals, phosphoproteins

This gene is a member of the following regulons

SigB regulon, SigM regulon, SigW regulon, Sigx regulon

The gene

Basic information

  • Locus tag: BSU02910

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: CAPAB/terDEXZ family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
    • phosphorylated on Arg-10 PubMed
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References